RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 AMACRQ9UHK6 382 aa18.11■□□□□ 0.49
SHKBP1-205ENST00000594973 SCN4AP35499 1836 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 ENO4A6NNW6 628 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 BHMG1C9JSJ3 638 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 AP1G2O75843 785 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 GH1P01241 217 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 CFHP08603 1231 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 IQCF3P0C7M6 154 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 NEFHP12036 1026 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 MCL1Q07820 350 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 ZNF568Q3ZCX4 644 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 MFN1Q8IWA4 741 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 TEX9Q8N6V9 391 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 IMPG2Q9BZV3 1241 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 CARD9Q9H257 536 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 GBA2Q9HCG7 927 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 GOLGA6L10A0A0M3HER8 536 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 ACKR2O00590 384 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 ABLIM1O14639 778 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 SPOPO43791 374 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 C22orf31O95567 290 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 TFAMQ00059 246 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 TCEAL1Q15170 157 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 MAMDC4Q6UXC1 1216 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 PIGWQ7Z7B1 504 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 WDR49Q8IV35 697 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 UBL4BQ8N7F7 174 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 VTA1Q9NP79 307 aa18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 NOVA2Q9UNW9 492 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-205ENST00000594973 UNGP13051 313 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 ECHS1P30084 290 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 GNA15P30679 374 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 BPIFB4P59827 614 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 HLTFQ14527 1009 aaKnown RBP eCLIP18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 EEF1DP3Q658K8 133 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 LLGL2Q6P1M3 1020 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 SLC30A9Q6PML9 568 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 MPZL3Q6UWV2 235 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 TSHZ1Q6ZSZ6 1077 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 GPR142Q7Z601 462 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 ZSWIM1Q9BR11 485 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 CPSF3Q9UKF6 684 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 L3MBTL1Q9Y468 752 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 CCDC188H7C350 402 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 MTA2O94776 668 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 CELF2O95319 508 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 SNAI1O95863 264 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 CD58P19256 250 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 PTENP60484 403 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 MYL6P60660 151 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 MBTD1Q05BQ5 628 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 RBBP8NLQ8NC74 664 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 PPTC7Q8NI37 304 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 ZNF317Q96PQ6 595 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 CELF4Q9BZC1 486 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 FZD8Q9H461 694 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 AKT3Q9Y243 479 aa18.09■□□□□ 0.49
SHKBP1-205ENST00000594973 MIF4GDA9UHW6 222 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 STRNO43815 780 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 DIAPH2O60879 1101 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 RRM1P23921 792 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 TBXAS1P24557 533 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 NSFP46459 744 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 GCLCP48506 637 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 DUOXA2Q1HG44 320 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 CCDC38Q502W7 563 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 ANKRD23Q86SG2 305 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 TMEM192Q8IY95 271 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 PTPN18Q99952 460 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 TRIM7Q9C029 511 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 UVRAGQ9P2Y5 699 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 SLC45A1Q9Y2W3 748 aa18.08■□□□□ 0.48
SHKBP1-205ENST00000594973 VTNP04004 478 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 NQO1P15559 274 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 MAGOHP61326 146 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 SPDYCQ5MJ68 293 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 DDX42Q86XP3 938 aaKnown RBP eCLIP18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 ZNF677Q86XU0 584 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 MCOLN2Q8IZK6 566 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 OR2W6PQ8NHA6 318 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 MAGOHBQ96A72 148 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 TLCD1Q96CP7 247 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 RPS6KC1Q96S38 1066 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 PTPRHQ9HD43 1115 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 ANAPC7Q9UJX3 599 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 TTC7AQ9ULT0 858 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 A0A087WZ62 844 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 TTI1O43156 1089 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 THAP12O43422 761 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 LINGO3P0C6S8 592 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 PROZP22891 400 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 EIF3BP55884 814 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 TRPC3Q13507 836 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 ZNF394Q53GI3 561 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 ZNF484Q5JVG2 852 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 CWF19L1Q69YN2 538 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 TBC1D1Q86TI0 1168 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 FDXACB1Q9BRP7 624 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 IFT122Q9HBG6 1241 aa18.07■□□□□ 0.48
SHKBP1-205ENST00000594973 ERVK-5Q9HDB9 667 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms