RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 MIOSQ9NXC5 875 aa14.1□□□□□ -0.15
VRK3-205ENST00000593919 CCDC151A5D8V7 595 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 C9IYK1 514 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 PIRO00625 290 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 THP07101 528 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 YWHAEP62258 255 aaKnown RBP14.09□□□□□ -0.15
VRK3-205ENST00000593919 CKAP4Q07065 602 aaKnown RBP14.09□□□□□ -0.15
VRK3-205ENST00000593919 BRD3Q15059 726 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 PLEKHG4Q58EX7 1191 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 SLC24A5Q71RS6 500 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 TXLNBQ8N3L3 684 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 PGBD4Q96DM1 585 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 SCLYQ96I15 445 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 PAWRQ96IZ0 340 aaKnown RBP14.09□□□□□ -0.15
VRK3-205ENST00000593919 ALS2CR12Q96Q35 445 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 FTHL17Q9BXU8 183 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 PPP1R12CQ9BZL4 782 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
VRK3-205ENST00000593919 SALL4Q9UJQ4 1053 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 BUB1O43683 1085 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 LRPAP1P30533 357 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 NAP1L1P55209 391 aaKnown RBP14.09□□□□□ -0.15
VRK3-205ENST00000593919 ZNF677Q86XU0 584 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 DBF4BQ8NFT6 615 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 WNT8AQ9H1J5 351 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 CYP3A43Q9HB55 503 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 ST7Q9NRC1 585 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 SLC38A7Q9NVC3 462 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 CACNG4Q9UBN1 327 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 ATP11BQ9Y2G3 1177 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 JRKLQ9Y4A0 524 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 SNX9Q9Y5X1 595 aa14.09□□□□□ -0.15
VRK3-205ENST00000593919 SASH3O75995 380 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 PLA2G4AP47712 749 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 CCL23P55773 120 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 LONRF2Q1L5Z9 754 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 ZNF560Q96MR9 790 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 C11orf49Q9H6J7 331 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 HMGXB4Q9UGU5 601 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 RAB21Q9UL25 225 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 SNX12Q9UMY4 172 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 ATP8B3O60423 1300 aa14.08□□□□□ -0.16
VRK3-205ENST00000593919 SPTLC1O15269 473 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 THAP12O43422 761 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 NCK2O43639 380 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 CILPO75339 1184 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 H2AFZP0C0S5 128 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 CYP2C18P33260 490 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 PNPLA4P41247 253 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 GALCP54803 685 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 VSNL1P62760 191 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 H2AFVQ71UI9 128 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 WHAMMQ8TF30 809 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 NOX5Q96PH1 765 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 TWNKQ96RR1 684 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 UBN1Q9NPG3 1134 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 TBX21Q9UL17 535 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 INPP5FQ9Y2H2 1132 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 KPNA7A9QM74 516 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 PDE2AO00408 941 aaPredicted RBP14.07□□□□□ -0.16
VRK3-205ENST00000593919 ATP8B1O43520 1251 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 EOMESO95936 686 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 POMCP01189 267 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 CFHP08603 1231 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 GZMAP12544 262 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 SSTR3P32745 418 aaPredicted RBP14.07□□□□□ -0.16
VRK3-205ENST00000593919 TAF6P49848 677 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 RAD23BP54727 409 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 INCA1Q0VD86 236 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 ORC1Q13415 861 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 LRRC26Q2I0M4 334 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 SMYD5Q6GMV2 418 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 ZNF606Q8WXB4 792 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 PSMB7Q99436 277 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 ISCUQ9H1K1 167 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 INTUQ9ULD6 942 aa14.07□□□□□ -0.16
VRK3-205ENST00000593919 ERLIN1O75477 346 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 FTLP02792 175 aaPredicted RBP14.06□□□□□ -0.16
VRK3-205ENST00000593919 ABCB4P21439 1286 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 CLCNKBP51801 687 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 LILRA4P59901 499 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 FAM189BP81408 668 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 C2orf54Q08AI8 447 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 TCTN1Q2MV58 587 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 SV2CQ496J9 727 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 SEPT8Q92599 483 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 APBB2Q92870 758 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 ZSWIM1Q9BR11 485 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 ELOVL4Q9GZR5 314 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 FAM124BQ9H5Z6 455 aaPredicted RBP14.06□□□□□ -0.16
VRK3-205ENST00000593919 GDAP2Q9NXN4 497 aa14.06□□□□□ -0.16
VRK3-205ENST00000593919 BARX2Q9UMQ3 279 aaPredicted RBP14.06□□□□□ -0.16
VRK3-205ENST00000593919 ANKRD62A6NC57 917 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 CASTOR2A6NHX0 329 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 RTN2O75298 545 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 CXCL10P02778 98 aa14.05□□□□□ -0.16
VRK3-205ENST00000593919 IGFBP6P24592 240 aaPredicted RBP14.05□□□□□ -0.16
VRK3-205ENST00000593919 NDST1P52848 882 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms