RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 WEE1P30291 646 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 ADSSP30520 456 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 GRM2Q14416 872 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 VEPH1Q14D04 833 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 TEAD2Q15562 447 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 ARHGAP15Q53QZ3 475 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 MFSD6LQ8IWD5 586 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 EFCAB13Q8IY85 973 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 MAML2Q8IZL2 1156 aaPredicted RBP14.34□□□□□ -0.11
APOC1-209ENST00000592885 OR10T2Q8NGX3 314 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 SPPL2BQ8TCT7 592 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 ZSWIM3Q96MP5 696 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 PYM1Q9BRP8 204 aaKnown RBP14.34□□□□□ -0.11
APOC1-209ENST00000592885 BACH2Q9BYV9 841 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 LRRC27Q9C0I9 530 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 CUEDC2Q9H467 287 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 SLITRK6Q9H5Y7 841 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 TMEM206Q9H813 350 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 ZNF334Q9HCZ1 680 aaPredicted RBP14.34□□□□□ -0.11
APOC1-209ENST00000592885 OBP2AQ9NY56 170 aa14.34□□□□□ -0.11
APOC1-209ENST00000592885 MTF2Q9Y483 593 aaPredicted RBP14.34□□□□□ -0.11
APOC1-209ENST00000592885 A0A1W2PRU2 124 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 KPNA7A9QM74 516 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 NRG2O14511 850 aaPredicted RBP14.33□□□□□ -0.12
APOC1-209ENST00000592885 ZNF263O14978 683 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 GDI1P31150 447 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 CEBPZQ03701 1054 aaKnown RBP14.33□□□□□ -0.12
APOC1-209ENST00000592885 FCHO2Q0JRZ9 810 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 SLC39A12Q504Y0 691 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 FAM173BQ6P4H8 233 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 STXBP4Q6ZWJ1 553 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 CCDC65Q8IXS2 484 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 DCP1BQ8IZD4 617 aaKnown RBP14.33□□□□□ -0.12
APOC1-209ENST00000592885 ATAD1Q8NBU5 361 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 SPATA18Q8TC71 538 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 CACTINQ8WUQ7 758 aaKnown RBP14.33□□□□□ -0.12
APOC1-209ENST00000592885 GCNAQ96QF7 691 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 TMEM209Q96SK2 561 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 TNMDQ9H2S6 317 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 PRMT8Q9NR22 394 aaPredicted RBP14.33□□□□□ -0.12
APOC1-209ENST00000592885 PANK4Q9NVE7 773 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 PCDHGA2Q9Y5H1 932 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 R4GN57 208 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 KIF26AQ9ULI4 1882 aaPredicted RBP14.33□□□□□ -0.12
APOC1-209ENST00000592885 GVINP1Q7Z2Y8 2422 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 CACNA1IQ9P0X4 2223 aa14.33□□□□□ -0.12
APOC1-209ENST00000592885 SHISA7A6NL88 538 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 HEPACAM2A8MVW5 462 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 CHADO15335 359 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 KINO60870 393 aaKnown RBP14.32□□□□□ -0.12
APOC1-209ENST00000592885 PPP6R2O75170 966 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 IDEP14735 1019 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 GJA1P17302 382 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 CD72P21854 359 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 CDC25CP30307 473 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 KCNA1Q09470 495 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 STK38Q15208 465 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 MAMSTRQ6ZN01 415 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 DNAJB7Q7Z6W7 309 aaPredicted RBP14.32□□□□□ -0.12
APOC1-209ENST00000592885 YAF2Q8IY57 180 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 SYCP3Q8IZU3 236 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 ZNF687Q8N1G0 1237 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 LRRC52Q8N7C0 313 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 LINC00301Q8NCQ3 95 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 KCNG4Q8TDN1 519 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 LEO1Q8WVC0 666 aaPredicted RBP14.32□□□□□ -0.12
APOC1-209ENST00000592885 SEPT5Q99719 369 aaPredicted RBP14.32□□□□□ -0.12
APOC1-209ENST00000592885 FAM213AQ9BRX8 229 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 FAM126AQ9BYI3 521 aaPredicted RBP14.32□□□□□ -0.12
APOC1-209ENST00000592885 RBAKQ9NYW8 714 aaPredicted RBP14.32□□□□□ -0.12
APOC1-209ENST00000592885 ITGA11Q9UKX5 1188 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 SLC27A5Q9Y2P5 690 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 PIAS3Q9Y6X2 628 aa14.32□□□□□ -0.12
APOC1-209ENST00000592885 PTPRZ1P23471 2315 aaPredicted RBP14.31□□□□□ -0.12
APOC1-209ENST00000592885 ARNTLO00327 626 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 EXTL3O43909 919 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 YEATS4O95619 227 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 ATF6P18850 670 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 GABRR2P28476 465 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 VIPR2P41587 438 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 CASP5P51878 434 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 FOXK2Q01167 660 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 TSPY1Q01534 308 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 PPP2R5DQ14738 602 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 MGAT5BQ3V5L5 792 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 WSCD1Q658N2 575 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 GAREM2Q75VX8 874 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 TMEM86AQ8N2M4 240 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 TTC9BQ8N6N2 239 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 CSGALNACT1Q8TDX6 532 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 FAM3CQ92520 227 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 NELL1Q92832 810 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
APOC1-209ENST00000592885 MKNK1Q9BUB5 465 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 IKZF4Q9H2S9 585 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 CHRDQ9H2X0 955 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 ATXN3LQ9H3M9 355 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 C8orf33Q9H7E9 229 aaPredicted RBP14.31□□□□□ -0.12
APOC1-209ENST00000592885 TBC1D7Q9P0N9 293 aa14.31□□□□□ -0.12
APOC1-209ENST00000592885 NCANO14594 1321 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms