RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 C16orf72Q14CZ0 275 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 GPATCH4Q5T3I0 446 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 IRF2BP2Q7Z5L9 587 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 ALDH16A1Q8IZ83 802 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 ARMC7Q9H6L4 198 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 CNGB3Q9NQW8 809 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 GID8Q9NWU2 228 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 ZNHIT2Q9UHR6 403 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 A0A088AWK7 358 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 CBX6O95503 412 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 OCM2P0CE71 109 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 OCMP0CE72 109 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 PTPN2P17706 415 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 TCEA1P23193 301 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 RCVRNP35243 200 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 SCNN1DP51172 638 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 SNAP25P60880 206 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 CDR2Q01850 454 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 PCSK7Q16549 785 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 TPCN2Q8NHX9 752 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 SUN5Q8TC36 379 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 PYROXD1Q8WU10 500 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 REEP2Q9BRK0 252 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 AMFRQ9UKV5 643 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 ZNF536O15090 1300 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 LAMB1P07942 1786 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 G3V3G9 751 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 DDX3XO00571 662 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 TRAFD1O14545 582 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 AKAP3O75969 853 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 EYA4O95677 639 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 FGGP02679 453 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 TFPTP0C1Z6 253 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 T-ENOLP0DO92 83 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 FOSL1P15407 271 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 PTPN4P29074 926 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 STAT1P42224 750 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 CASP4P49662 377 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 GRM2Q14416 872 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 PPP1R18Q6NYC8 613 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 RFPL4BQ6ZWI9 263 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 AMIGO3Q86WK7 504 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 RAVER1Q8IY67 606 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 SYCE1Q8N0S2 351 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 NAP1L4Q99733 375 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
SMARCA4-217ENST00000591595 SPATA31A5Q5VU36 1347 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 SPATA31A7Q8IWB4 1347 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 XIRP1Q702N8 1843 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 CCDC188H7C350 402 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 CYP1A2P05177 515 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 RPL5P46777 297 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 GSSP48637 474 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 QRICH1Q2TAL8 776 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 CGB2Q6NT52 195 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 FOXR2Q6PJQ5 311 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 CATSPER3Q86XQ3 398 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 OR7G1Q8NGA0 311 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 GIPC2Q8TF65 315 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 TLE6Q9H808 572 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 USP40Q9NVE5 1235 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 IRS2Q9Y4H2 1338 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 COL22A1Q8NFW1 1626 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 RSPH10B2B2RC85 870 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 PARNO95453 639 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 NR3C1P04150 777 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 HLA-DOAP06340 250 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 RSPH10BP0C881 870 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 S100A5P33763 92 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 CDC16Q13042 620 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 MED21Q13503 144 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 ARSHQ5FYA8 562 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 FYB2Q5VWT5 728 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 FRMD5Q7Z6J6 570 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 ACTRT1Q8TDG2 376 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 SCFD2Q8WU76 684 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 EHD1Q9H4M9 534 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 EBF3Q9H4W6 596 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 UVRAGQ9P2Y5 699 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 DMTF1Q9Y222 760 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 CHKBQ9Y259 395 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 PCDHA2Q9Y5H9 948 aa12.85□□□□□ -0.35
SMARCA4-217ENST00000591595 ARHGAP10A1A4S6 786 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 ENO2P09104 434 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 NUDT17P0C025 328 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 KRT13P13646 458 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 CDH3P22223 829 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 KPNA1P52294 538 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 SPOPLQ6IQ16 392 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 CCDC81Q6ZN84 652 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 COL23A1Q86Y22 540 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 GLYCTKQ8IVS8 523 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms