RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 MGEA5O60502 916 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 URI1O94763 535 aaPredicted RBP13.82□□□□□ -0.2
PTBP1-216ENST00000590887 CXCL10P02778 98 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 CYP1A1P04798 512 aaPredicted RBP13.82□□□□□ -0.2
PTBP1-216ENST00000590887 CALB1P05937 261 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 CHRNB2P17787 502 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 GNL1P36915 607 aaPredicted RBP13.82□□□□□ -0.2
PTBP1-216ENST00000590887 LHX1P48742 406 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 GUCY2FP51841 1108 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 SLC8A3P57103 927 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 LILRA4P59901 499 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 TUBB4BP68371 445 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 CNGA2Q16280 664 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 TRIM60Q495X7 471 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 DCLRE1AQ6PJP8 1040 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 SLC35F6Q8N357 371 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 FAM84AQ96KN4 292 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 MRPL9Q9BYD2 267 aaKnown RBP13.82□□□□□ -0.2
PTBP1-216ENST00000590887 STRIP2Q9ULQ0 834 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 ATP11BQ9Y2G3 1177 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 SCINQ9Y6U3 715 aa13.82□□□□□ -0.2
PTBP1-216ENST00000590887 TDRD15B5MCY1 1934 aaKnown RBP13.82□□□□□ -0.2
PTBP1-216ENST00000590887 A8MXQ7 604 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 CYB561D2O14569 222 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 ENPP3O14638 875 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 TRAPPC3O43617 180 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 NBNO60934 754 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 PFKMP08237 780 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 UNGP13051 313 aaPredicted RBP13.81□□□□□ -0.2
PTBP1-216ENST00000590887 SCNN1GP51170 649 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 TERF1P54274 439 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 RAD23BP54727 409 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 CENPCQ03188 943 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 TAP1Q03518 808 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 RNASELQ05823 741 aaKnown RBP13.81□□□□□ -0.2
PTBP1-216ENST00000590887 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
PTBP1-216ENST00000590887 FAAP100Q0VG06 881 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 IKBKEQ14164 716 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 ZNF394Q53GI3 561 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 NOMO2Q5JPE7 1267 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 CNKSR3Q6P9H4 555 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 PHF13Q86YI8 300 aaPredicted RBP13.81□□□□□ -0.2
PTBP1-216ENST00000590887 DBF4BQ8NFT6 615 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 LPPQ93052 612 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 ZFP42Q96MM3 310 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 SMYD3Q9H7B4 428 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 AVENQ9NQS1 362 aaPredicted RBP13.81□□□□□ -0.2
PTBP1-216ENST00000590887 CTTNBP2NLQ9P2B4 639 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 WDR35Q9P2L0 1181 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 HESX1Q9UBX0 185 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 GTF3C4Q9UKN8 822 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 NCANO14594 1321 aa13.81□□□□□ -0.2
PTBP1-216ENST00000590887 RCCD1A6NED2 376 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 MOCS3O95396 460 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 SETSIPP0DME0 302 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 ODC1P11926 461 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 PRLRP16471 622 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 DESP17661 470 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 TCP1P17987 556 aaKnown RBP13.8□□□□□ -0.2
PTBP1-216ENST00000590887 ABCB4P21439 1286 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 IBSPP21815 317 aaPredicted RBP13.8□□□□□ -0.2
PTBP1-216ENST00000590887 WARSP23381 471 aaKnown RBP13.8□□□□□ -0.2
PTBP1-216ENST00000590887 CDH5P33151 784 aaPredicted RBP13.8□□□□□ -0.2
PTBP1-216ENST00000590887 NDST1P52848 882 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 HADHBP55084 474 aaKnown RBP13.8□□□□□ -0.2
PTBP1-216ENST00000590887 CDH8P55286 799 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 MBTPS1Q14703 1052 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 ERICH1Q86X53 443 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 TMEM199Q8N511 208 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 GSTCDQ8NEC7 633 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 SLC35G2Q8TBE7 412 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 ZNF653Q96CK0 615 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 PAWRQ96IZ0 340 aaKnown RBP13.8□□□□□ -0.2
PTBP1-216ENST00000590887 PCDHB18PQ96TA0 734 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 ADAM22Q9P0K1 906 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 PRKAG2Q9UGJ0 569 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 INPP5FQ9Y2H2 1132 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 PCDHGC5Q9Y5F6 944 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 SAR1BQ9Y6B6 198 aa13.8□□□□□ -0.2
PTBP1-216ENST00000590887 POMCP01189 267 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 CYP1A2P05177 515 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 PCSK1P29120 753 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 RAP1GAPP47736 663 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 MNX1P50219 401 aaPredicted RBP13.79□□□□□ -0.2
PTBP1-216ENST00000590887 NOMO3P69849 1222 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 CKAP4Q07065 602 aaKnown RBP13.79□□□□□ -0.2
PTBP1-216ENST00000590887 CLUL1Q15846 466 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 UPP1Q16831 310 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 NAA35Q5VZE5 725 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 ADGRF2Q8IZF7 708 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 MCOLN2Q8IZK6 566 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 CRYBG2Q8N1P7 616 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 THEM5Q8N1Q8 247 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 SLC4A11Q8NBS3 891 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 IPO4Q8TEX9 1081 aaKnown RBP13.79□□□□□ -0.2
PTBP1-216ENST00000590887 ELMO3Q96BJ8 720 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 CYFIP2Q96F07 1278 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 COLEC11Q9BWP8 271 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 PPP1R12CQ9BZL4 782 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms