RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 AP1B1Q10567 949 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 FAM47CQ5HY64 1035 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 DUPD1Q68J44 220 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 RGS9BPQ6ZS82 235 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 COL1A1P02452 1464 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 RBP3P10745 1247 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 AP2B1P63010 937 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 KCNT1Q5JUK3 1230 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 TMEM121Q9BTD3 319 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 GCOM2Q9BZD3 368 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 MYOZ2Q9NPC6 264 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 ANP32DO95626 131 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 MX2P20592 715 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 MXD4Q14582 209 aaPredicted RBP17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 PGM5Q15124 567 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 RASSF3Q86WH2 238 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 LRRC71Q8N4P6 559 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 CEP120Q8N960 986 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 ACAP3Q96P50 834 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 NINJ2Q9NZG7 142 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 KIF1CO43896 1103 aaKnown RBP17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 CALCAP01258 141 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 RBBP5Q15291 538 aaKnown RBP17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 Q3C1V9 767 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 DACT2Q5SW24 774 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 AGAP1Q9UPQ3 857 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 GABPAQ06546 454 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 TFDP3Q5H9I0 405 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 PRAMEF18Q5VWM3 479 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 PRELID2Q8N945 189 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 KIF12Q96FN5 646 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 CTNNAL1Q9UBT7 734 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 RASSF10A6NK89 507 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 ART3Q13508 389 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 PARD3BQ8TEW8 1205 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 CCDC97Q96F63 343 aaPredicted RBP17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 LRRC4BQ9NT99 713 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 NDE1Q9NXR1 346 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 ERMARDQ5T6L9 678 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 SPOCD1Q6ZMY3 1216 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 ARMCX2Q7L311 632 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 FUKQ8N0W3 1084 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 HSD17B14Q9BPX1 270 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 MTMR12Q9C0I1 747 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 BATF3Q9NR55 127 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 VAV3Q9UKW4 847 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 NUB1Q9Y5A7 615 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 SRRM3A6NNA2 597 aaPredicted RBP17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 IREB2P48200 963 aaKnown RBP17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 SLC35G1Q2M3R5 365 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 CYP4F11Q9HBI6 524 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 RXFP1Q9HBX9 757 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 PCYOX1Q9UHG3 505 aa17.97■□□□□ 0.47
SMARCA4-215ENST00000590574 RGPD5Q99666 1765 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 THOC5Q13769 683 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 RASGEF1CQ8N431 466 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 FBXO36Q8NEA4 188 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 UBA3Q8TBC4 463 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 SEPT1Q8WYJ6 367 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 CENPTQ96BT3 561 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 SERPINI1Q99574 410 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 PDCD2LQ9BRP1 358 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 PCMTD2Q9NV79 361 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 SLC5A4Q9NY91 659 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 MAP3K20Q9NYL2 800 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 GRM1Q13255 1194 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 ATXN2LQ8WWM7 1075 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 RSAD1Q9HA92 442 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 EPS15L1Q9UBC2 864 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 PIK3CDO00329 1044 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 ORC1Q13415 861 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 APOBEC3FQ8IUX4 373 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 ABRAQ8N0Z2 381 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 NEUROG2Q9H2A3 272 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 MID2Q9UJV3 735 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 USP20Q9Y2K6 914 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 MTO1Q9Y2Z2 717 aaKnown RBP17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 ADRB2P07550 413 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 ST13P4Q8IZP2 240 aaPredicted RBP17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 LRGUKQ96M69 825 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 CGRRF1Q99675 332 aa17.96■□□□□ 0.47
SMARCA4-215ENST00000590574 LCP1P13796 627 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 SH3BGRP55822 239 aaPredicted RBP17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 MORF4L2Q15014 288 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 FSCBQ5H9T9 825 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 ATF7IP2Q5U623 682 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 CDR2LQ86X02 465 aaPredicted RBP17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 DCLK2Q8N568 766 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 ALG3Q92685 438 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 A8MXQ7 604 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 DNAJC8O75937 253 aaPredicted RBP17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 OTUD4Q01804 1114 aaKnown RBP17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 TTLL4Q14679 1199 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 NLRP9Q7RTR0 991 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 ERVK-5Q9HDB9 667 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 GOLGA8QA0A0J9YX86 632 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 GOLGA8OA6NCC3 632 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 GOLGA8NF8WBI6 632 aa17.95■□□□□ 0.46
SMARCA4-215ENST00000590574 GSDMBQ8TAX9 411 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms