RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	SNX9	Q9Y5X1	595 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	SQOR	Q9Y6N5	450 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	SCIN	Q9Y6U3	715 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	CENPF	P49454	3210 aa		13.61	□□□□□ -0.23
RAB8A-205	ENST00000589697	TMEM110-MUSTN1	A8MSY1	372 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	MIF4GD	A9UHW6	222 aa	Known RBP	13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	PPEF2	O14830	753 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	CALB1	P05937	261 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	RRM1	P23921	792 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	CDH5	P33151	784 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	LPIN1	Q14693	890 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	MESD	Q14696	234 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	MMS22L	Q6ZRQ5	1243 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	SLC43A3	Q8NBI5	491 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	C1orf131	Q8NDD1	294 aa	Known RBP	13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	SH3TC2	Q8TF17	1288 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	WHAMM	Q8TF30	809 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	ZSWIM1	Q9BR11	485 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	NT5C1A	Q9BXI3	368 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	ELOVL4	Q9GZR5	314 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	MRPL47	Q9HD33	250 aa	Known RBP	13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	ANAPC7	Q9UJX3	599 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	PHF24	Q9UPV7	400 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	VDR	P11473	427 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	MMP8	P22894	467 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	NDST1	P52848	882 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	SV2C	Q496J9	727 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	SGO2	Q562F6	1265 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	ZNF618	Q5T7W0	954 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	UBL4B	Q8N7F7	174 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	NOA1	Q8NC60	698 aa	Known RBP	13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	PPP1R10	Q96QC0	940 aa	Known RBP	13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	TWNK	Q96RR1	684 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	TRAIP	Q9BWF2	469 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	SEZ6L	Q9BYH1	1024 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	LHX5	Q9H2C1	402 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	RNF19A	Q9NV58	838 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	KIAA1257	Q9ULG3	409 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	ALG6	Q9Y672	507 aa		13.6	□□□□□ -0.23
RAB8A-205	ENST00000589697	PIR	O00625	290 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	PTGES	O14684	152 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	SPOP	O43791	374 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	CKB	P12277	381 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	MLH1	P40692	756 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	TAF6	P49848	677 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	ORC1	Q13415	861 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	CCDC70	Q6NSX1	233 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	MSANTD4	Q8NCY6	345 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	SPATA4	Q8NEY3	305 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	MS4A14	Q96JA4	679 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	HEXIM2	Q96MH2	286 aa	Known RBP	13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	ZFP42	Q96MM3	310 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	DNAI2	Q9GZS0	605 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	TRPV6	Q9H1D0	765 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	PARVA	Q9NVD7	372 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	GIT1	Q9Y2X7	761 aa		13.59	□□□□□ -0.23
RAB8A-205	ENST00000589697	KPNA7	A9QM74	516 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	ARVCF	O00192	962 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	PGRMC1	O00264	195 aa	Known RBP	13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	DNM1L	O00429	736 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	CEP104	O60308	925 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	SKI	P12755	728 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	COMT	P21964	271 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	LRPAP1	P30533	357 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	SOX4	Q06945	474 aa	Predicted RBP	13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	C2orf54	Q08AI8	447 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	PTP4A2	Q12974	167 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	DSC3	Q14574	896 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	STIL	Q15468	1287 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	C2CD6	Q53TS8	623 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	PLEKHA7	Q6IQ23	1121 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	DENND1B	Q6P3S1	775 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	MRPL10	Q7Z7H8	261 aa	Known RBP	13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	ERICH1	Q86X53	443 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	UNC93B1	Q9H1C4	597 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	WNT8A	Q9H1J5	351 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	CARD9	Q9H257	536 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	GOLGA2P5	Q9HBQ8	144 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	GDAP2	Q9NXN4	497 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	SMARCAL1	Q9NZC9	954 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	EHD2	Q9NZN4	543 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	STRIP2	Q9ULQ0	834 aa		13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.58	□□□□□ -0.23
RAB8A-205	ENST00000589697	SCN1A	P35498	2009 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697		M0QYV0	167 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	MYO1F	O00160	1098 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697		O00370	1275 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	DDX3Y	O15523	660 aa	Known RBP	13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	ZNF623	O75123	536 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	TH	P07101	528 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	CNGA2	Q16280	664 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	UNC93A	Q86WB7	457 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	ACTRT1	Q8TDG2	376 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	BTBD6	Q96KE9	485 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	GAD1	Q99259	594 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	ADAM2	Q99965	735 aa		13.58	□□□□□ -0.24
RAB8A-205	ENST00000589697	MRPL45	Q9BRJ2	306 aa	Known RBP	13.58	□□□□□ -0.24

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