RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 PLEKHH3Q7Z736 793 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 ZNF410Q86VK4 478 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 CDR2LQ86X02 465 aaPredicted RBP16.19■□□□□ 0.18
MBD1-217ENST00000588937 ERICH1Q86X53 443 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 NT5DC4Q86YG4 428 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 ZNF784Q8NCA9 323 aaPredicted RBP16.19■□□□□ 0.18
MBD1-217ENST00000588937 FBXO25Q8TCJ0 367 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 NLRP7Q8WX94 980 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 ZBTB10Q96DT7 871 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 MAML3Q96JK9 1138 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 ADPGKQ9BRR6 497 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 BCO2Q9BYV7 579 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 LHX5Q9H2C1 402 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 FAM124BQ9H5Z6 455 aaPredicted RBP16.19■□□□□ 0.18
MBD1-217ENST00000588937 VRTNQ9H8Y1 702 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 CYP3A43Q9HB55 503 aa16.19■□□□□ 0.18
MBD1-217ENST00000588937 NXF1Q9UBU9 619 aaKnown RBP16.19■□□□□ 0.18
MBD1-217ENST00000588937 HOXD8P13378 290 aaPredicted RBP16.18■□□□□ 0.18
MBD1-217ENST00000588937 NR1D1P20393 614 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 SSR1P43307 286 aaKnown RBP16.18■□□□□ 0.18
MBD1-217ENST00000588937 HNRNPH2P55795 449 aaKnown RBP16.18■□□□□ 0.18
MBD1-217ENST00000588937 CDC42EP1Q00587 391 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 IFFO1Q0D2I5 559 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 PIGHQ14442 188 aaPredicted RBP16.18■□□□□ 0.18
MBD1-217ENST00000588937 FAM110CQ1W6H9 321 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 LRRC38Q5VT99 294 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 SCARA3Q6AZY7 606 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 CROCCP2Q86T23 111 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 C1orf127Q8N9H9 656 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 OR6J1Q8NGC5 347 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 ART4Q93070 314 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 RBM41Q96IZ5 413 aaKnown RBP16.18■□□□□ 0.18
MBD1-217ENST00000588937 HHIPL1Q96JK4 782 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 SCLT1Q96NL6 688 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 PTPN18Q99952 460 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 PABPC3Q9H361 631 aaKnown RBP16.18■□□□□ 0.18
MBD1-217ENST00000588937 WHRNQ9P202 907 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 USTQ9Y2C2 406 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 PTPN22Q9Y2R2 807 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 MANSC4A6NHS7 340 aaPredicted RBP16.18■□□□□ 0.18
MBD1-217ENST00000588937 RRN3P2A6NIE6 340 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 VTNP04004 478 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 NFICP08651 508 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 ARF4P18085 180 aaPredicted RBP16.18■□□□□ 0.18
MBD1-217ENST00000588937 INHBEP58166 350 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 MKRN3Q13064 507 aaKnown RBP16.18■□□□□ 0.18
MBD1-217ENST00000588937 ACVR2BQ13705 512 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 GRIK4Q16099 956 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 WDR72Q3MJ13 1102 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 JADE1Q6IE81 842 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 RGMBQ6NW40 437 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 LRRC31Q6UY01 552 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 HOOK3Q86VS8 718 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 TMEM192Q8IY95 271 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 RCOR2Q8IZ40 523 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 TTC39CQ8N584 583 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 C3orf20Q8ND61 904 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 ATL2Q8NHH9 583 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 C1orf54Q8WWF1 131 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 TINF2Q9BSI4 451 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 DCLK3Q9C098 648 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 TSPYL1Q9H0U9 437 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 SIX4Q9UIU6 781 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 TLL2Q9Y6L7 1015 aa16.18■□□□□ 0.18
MBD1-217ENST00000588937 MGAMO43451 1857 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.17■□□□□ 0.18
MBD1-217ENST00000588937 SLC15A5A6NIM6 579 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 ITGB3P05106 788 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 MMP3P08254 477 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 NUDT17P0C025 328 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 CD19P15391 556 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 SMPD1P17405 629 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 KCNJ1P48048 391 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 IRAK1P51617 712 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 TAS2R40P59535 323 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 GNGT1P63211 74 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 CAV1Q03135 178 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 KRT17Q04695 432 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 TMEM132DQ14C87 1099 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 CCNG2Q16589 344 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 ODF2Q5BJF6 829 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 DENND2CQ68D51 928 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 SH2D3CQ8N5H7 860 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 CPB2Q96IY4 423 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 OSBPL8Q9BZF1 889 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 CENPHQ9H3R5 247 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 WDR35Q9P2L0 1181 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 ITGA11Q9UKX5 1188 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 POLIQ9UNA4 740 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 C2CD2Q9Y426 696 aa16.17■□□□□ 0.18
MBD1-217ENST00000588937 TCRBV5S1A1TA0A578 114 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 EIF3HO15372 352 aaKnown RBP eCLIP16.16■□□□□ 0.18
MBD1-217ENST00000588937 SLC10A3P09131 477 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 RALAP11233 206 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 ITIH2P19823 946 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 ZNF157P51786 506 aaPredicted RBP16.16■□□□□ 0.18
MBD1-217ENST00000588937 COPS2P61201 443 aa16.16■□□□□ 0.18
MBD1-217ENST00000588937 KLF1Q13351 362 aaPredicted RBP16.16■□□□□ 0.18
MBD1-217ENST00000588937 IRF5Q13568 498 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms