RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 RTP3Q9BQQ7 232 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 MRPL45Q9BRJ2 306 aaKnown RBP20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 CRACR2AQ9BSW2 395 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 EMILIN2Q9BXX0 1053 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 NIF3L1Q9GZT8 377 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 GCNT4Q9P109 453 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 FNIP2Q9P278 1114 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 FBXL5Q9UKA1 691 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 BACE2Q9Y5Z0 518 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 CDY1Q9Y6F8 540 aa20.33■□□□□ 0.85
CLPTM1-209ENST00000588855 H7C4K7 107 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 P4HA1P13674 534 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 COPB1P53618 953 aaKnown RBP20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 HYAL1Q12794 435 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 LRMPQ12912 555 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 DUSP6Q16828 381 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 WDR44Q5JSH3 913 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 DPH6Q7L8W6 267 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 TATDN2Q93075 761 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 PPP2R3CQ969Q6 453 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 INTS2Q9H0H0 1204 aaKnown RBP20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 SDCBP2Q9H190 292 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 HCRTO43612 131 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 CLASP2O75122 1294 aaKnown RBP20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 ADH1AP07327 375 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 NDUFV1P49821 464 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 CDH8P55286 799 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 RNF214Q8ND24 703 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 EHBP1Q8NDI1 1231 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 OR10T2Q8NGX3 314 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 TMEM209Q96SK2 561 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 BCO2Q9BYV7 579 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 IGFLR1Q9H665 355 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 NME7Q9Y5B8 376 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 COL6A3P12111 3177 aa20.32■□□□□ 0.84
CLPTM1-209ENST00000588855 SPTBN5Q9NRC6 3674 aaKnown RBP20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 GTPBP10A4D1E9 387 aaKnown RBP20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 GOLGA6L19H0YKK7 550 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 GABRDO14764 452 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 TACC1O75410 805 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 TPM2P07951 284 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 OR4Q2P0C623 313 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 WARSP23381 471 aaKnown RBP20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 KLRC2P26717 231 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 OR1D2P34982 312 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 TPM4P67936 248 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 CCDC85BQ15834 202 aaPredicted RBP20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 SLC8B1Q6J4K2 584 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 GBP6Q6ZN66 633 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 SPATA18Q8TC71 538 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 NT5C1BQ96P26 610 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 ARID3AQ99856 593 aa20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 DDX43Q9NXZ2 648 aaKnown RBP20.31■□□□□ 0.84
CLPTM1-209ENST00000588855 MTCL1Q9Y4B5 1905 aaKnown RBP20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 OR6C75A6NL08 312 aa20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 WEE2P0C1S8 567 aa20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 SLC9A1P19634 815 aa20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 ACAT1P24752 427 aaKnown RBP20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 ARPP19P56211 112 aa20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 RBM10P98175 930 aaKnown RBP20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 ROR1Q01973 937 aa20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 EXOC3L4Q17RC7 722 aa20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 TRIM65Q6PJ69 517 aa20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 PALB2Q86YC2 1186 aa20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 XIRP2A4UGR9 3374 aa20.3■□□□□ 0.84
CLPTM1-209ENST00000588855 LRRC10BA6NIK2 292 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 LGALS16A8MUM7 142 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 LMO2P25791 158 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 LHX1P48742 406 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 CLCN4P51793 760 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 APBA1Q02410 837 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 ARHGEF19Q8IW93 802 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 THEM5Q8N1Q8 247 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 VN1R2Q8NFZ6 395 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 OR6B3Q8NGW1 331 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 PPM1EQ8WY54 764 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 CDCA3Q99618 268 aaPredicted RBP20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 HCFC2Q9Y5Z7 792 aa20.29■□□□□ 0.84
CLPTM1-209ENST00000588855 BRWD1Q9NSI6 2320 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 WDR27A2RRH5 827 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 LINC01565O15544 149 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 FAM163BP0C2L3 166 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 CPB1P15086 417 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 EPCAMP16422 314 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 PON1P27169 355 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 CUL2Q13617 745 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 RAB33AQ14088 237 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 LLGL2Q6P1M3 1020 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 PPM1KQ8N3J5 372 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 SLC22A17Q8WUG5 538 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 FAXDC2Q96IV6 333 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 OXCT2Q9BYC2 517 aaPredicted RBP20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 SNX25Q9H3E2 840 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 CYP3A43Q9HB55 503 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 HMGXB4Q9UGU5 601 aa20.28■□□□□ 0.84
CLPTM1-209ENST00000588855 TGM5O43548 720 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 GLP2RO95838 553 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 GLUD1P00367 558 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 PDGFRBP09619 1106 aa20.27■□□□□ 0.84
CLPTM1-209ENST00000588855 CD58P19256 250 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms