RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 HSFX1Q9UBD0 423 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 CDH9Q9ULB4 789 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 STXBP5LQ9Y2K9 1186 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 CHD7Q9P2D1 2997 aa9.71□□□□□ -0.86
CIRBP-218ENST00000588344 HIDE1A8MVS5 230 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 CLASP2O75122 1294 aaKnown RBP9.7□□□□□ -0.86
CIRBP-218ENST00000588344 GLUD1P00367 558 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 SERPINC1P01008 464 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 TPM3P06753 285 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 HOXB8P17481 243 aaPredicted RBP9.7□□□□□ -0.86
CIRBP-218ENST00000588344 RFX1P22670 979 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 IGFBP6P24592 240 aaPredicted RBP9.7□□□□□ -0.86
CIRBP-218ENST00000588344 ELF1P32519 619 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 OR1D2P34982 312 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 TSPY1Q01534 308 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 GPR17Q13304 367 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 NFE2Q16621 373 aaPredicted RBP9.7□□□□□ -0.86
CIRBP-218ENST00000588344 UVSSAQ2YD98 709 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 TCEAL5Q5H9L2 206 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 MIIPQ5JXC2 388 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 CYP26C1Q6V0L0 522 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 TMEM184AQ6ZMB5 413 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 EFHBQ8N7U6 833 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 OR6B3Q8NGW1 331 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 ZNF461Q8TAF7 563 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 CASP10Q92851 521 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 SEMA4DQ92854 862 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 TNIP3Q96KP6 325 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 BCO2Q9BYV7 579 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 VPS16Q9H269 839 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 DZANK1Q9NVP4 752 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 DDX43Q9NXZ2 648 aaKnown RBP9.7□□□□□ -0.86
CIRBP-218ENST00000588344 FBXL5Q9UKA1 691 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 KIAA1257Q9ULG3 409 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 L1RE1Q9UN81 338 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 TIMM13Q9Y5L4 95 aaPredicted RBP9.7□□□□□ -0.86
CIRBP-218ENST00000588344 CDY1Q9Y6F8 540 aa9.7□□□□□ -0.86
CIRBP-218ENST00000588344 LGALS16A8MUM7 142 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 A8MXQ7 604 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 ABLIM3O94929 683 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 ATF2P15336 505 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 NRIP1P48552 1158 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 TUFMP49411 452 aaKnown RBP9.69□□□□□ -0.86
CIRBP-218ENST00000588344 CLCN4P51793 760 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 COPB1P53618 953 aaKnown RBP9.69□□□□□ -0.86
CIRBP-218ENST00000588344 MFAP3P55082 362 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 GCNT1Q02742 428 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 INCA1Q0VD86 236 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 PTPRSQ13332 1948 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 ADAM15Q13444 863 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 CUL2Q13617 745 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 COL19A1Q14993 1142 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 CTC1Q2NKJ3 1217 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 HSP90AA4PQ58FG1 418 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 LILRA6Q6PI73 481 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 PRSS55Q6UWB4 352 aaPredicted RBP9.69□□□□□ -0.86
CIRBP-218ENST00000588344 CCDC149Q6ZUS6 474 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 RBM23Q86U06 439 aaKnown RBP9.69□□□□□ -0.86
CIRBP-218ENST00000588344 LUZP1Q86V48 1076 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 CRYBG2Q8N1P7 616 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 LMO3Q8TAP4 145 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 SPPL2BQ8TCT7 592 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 SLC22A17Q8WUG5 538 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 AUTS2Q8WXX7 1259 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 PABPC5Q96DU9 382 aaKnown RBP9.69□□□□□ -0.86
CIRBP-218ENST00000588344 B3GALT6Q96L58 329 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 PI4K2AQ9BTU6 479 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 INTS2Q9H0H0 1204 aaKnown RBP9.69□□□□□ -0.86
CIRBP-218ENST00000588344 ZCWPW1Q9H0M4 648 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 HSD3B7Q9H2F3 369 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 GCNT4Q9P109 453 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 APEX2Q9UBZ4 518 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 AFF4Q9UHB7 1163 aaKnown RBP9.69□□□□□ -0.86
CIRBP-218ENST00000588344 BARX2Q9UMQ3 279 aaPredicted RBP9.69□□□□□ -0.86
CIRBP-218ENST00000588344 COG5Q9UP83 839 aa9.69□□□□□ -0.86
CIRBP-218ENST00000588344 PER2O15055 1255 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 TGM5O43548 720 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 CPB1P15086 417 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 PON1P27169 355 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 ASPAP45381 313 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 UBXN1Q04323 297 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 HYAL1Q12794 435 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 KCNC3Q14003 757 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 SCARA3Q6AZY7 606 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 FAM171BQ6P995 826 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 TRIM65Q6PJ69 517 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 C4orf50Q6ZRC1 276 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 FMNL3Q8IVF7 1028 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 TCEAL8Q8IYN2 117 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 MICALL1Q8N3F8 863 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 TMEM130Q8N3G9 435 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 PPM1KQ8N3J5 372 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 KBTBD7Q8WVZ9 684 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 TATDN2Q93075 761 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 FUBP3Q96I24 572 aaKnown RBP eCLIP9.68□□□□□ -0.86
CIRBP-218ENST00000588344 FAM84AQ96KN4 292 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 CEP295NLQ96MC4 621 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 ERGIC2Q96RQ1 377 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 CRACR2AQ9BSW2 395 aa9.68□□□□□ -0.86
CIRBP-218ENST00000588344 NT5C1AQ9BXI3 368 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms