RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 SCINQ9Y6U3 715 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 CEP104O60308 925 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 CALB1P05937 261 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 COMTP21964 271 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 TRIM71Q2Q1W2 868 aaKnown RBP17.58■□□□□ 0.4
NFIX-210ENST00000588228 FAM26DQ5JW98 314 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 FBXO47Q5MNV8 452 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 PLEKHA7Q6IQ23 1121 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 MMS22LQ6ZRQ5 1243 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 RASGEF1CQ8N431 466 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 ARRDC4Q8NCT1 418 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 C1orf131Q8NDD1 294 aaKnown RBP17.58■□□□□ 0.4
NFIX-210ENST00000588228 ZNF560Q96MR9 790 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 TWNKQ96RR1 684 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 CARD9Q9H257 536 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 HMGXB4Q9UGU5 601 aa17.58■□□□□ 0.4
NFIX-210ENST00000588228 TMEM110-MUSTN1A8MSY1 372 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 PIRO00625 290 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 PPEF2O14830 753 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 CAND2O75155 1236 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 RHOXF2BP0C7M4 288 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 VDRP11473 427 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 PNPLA4P41247 253 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 CCDC70Q6NSX1 233 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 UBL4BQ8N7F7 174 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 USP38Q8NB14 1042 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 RHOXF2Q9BQY4 288 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 WNT8AQ9H1J5 351 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 AGO3Q9H9G7 860 aaKnown RBP17.57■□□□□ 0.4
NFIX-210ENST00000588228 TRMT13Q9NUP7 481 aaKnown RBP17.57■□□□□ 0.4
NFIX-210ENST00000588228 ANAPC7Q9UJX3 599 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 RAB21Q9UL25 225 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 KIAA1257Q9ULG3 409 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 TTC7AQ9ULT0 858 aaPredicted RBP17.57■□□□□ 0.4
NFIX-210ENST00000588228 SNX9Q9Y5X1 595 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 CITO14578 2027 aa17.57■□□□□ 0.4
NFIX-210ENST00000588228 TARSL2A2RTX5 802 aaKnown RBP17.56■□□□□ 0.4
NFIX-210ENST00000588228 PGRMC1O00264 195 aaKnown RBP17.56■□□□□ 0.4
NFIX-210ENST00000588228 NDST1P52848 882 aa17.56■□□□□ 0.4
NFIX-210ENST00000588228 PAK2Q13177 524 aa17.56■□□□□ 0.4
NFIX-210ENST00000588228 WDTC1Q8N5D0 677 aa17.56■□□□□ 0.4
NFIX-210ENST00000588228 CD101Q93033 1021 aa17.56■□□□□ 0.4
NFIX-210ENST00000588228 BTBD6Q96KE9 485 aa17.56■□□□□ 0.4
NFIX-210ENST00000588228 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.56■□□□□ 0.4
NFIX-210ENST00000588228 NT5C1AQ9BXI3 368 aa17.56■□□□□ 0.4
NFIX-210ENST00000588228 PARVAQ9NVD7 372 aa17.56■□□□□ 0.4
NFIX-210ENST00000588228 PADI3Q9ULW8 664 aa17.56■□□□□ 0.4
NFIX-210ENST00000588228 SQORQ9Y6N5 450 aa17.56■□□□□ 0.4
NFIX-210ENST00000588228 MYO1FO00160 1098 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 ITGA4P13612 1032 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 LRPAP1P30533 357 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 MAMLD1Q13495 774 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 CNGA2Q16280 664 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 C2CD6Q53TS8 623 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 DENND1BQ6P3S1 775 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 SLC43A3Q8NBI5 491 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 HEXIM2Q96MH2 286 aaKnown RBP17.55■□□□□ 0.4
NFIX-210ENST00000588228 TRAIPQ9BWF2 469 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 TMEM59LQ9UK28 342 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.55■□□□□ 0.4
NFIX-210ENST00000588228 PTCH2Q9Y6C5 1203 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 A0A1W2PQ45 241 aaPredicted RBP17.55■□□□□ 0.4
NFIX-210ENST00000588228 A0A1W2PQY0 241 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 CCDC66A2RUB6 948 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 PTGESO14684 152 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 SPOPO43791 374 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 GHRP10912 638 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 CTNNA2P26232 953 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 CD52P31358 61 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 CTNNA1P35221 906 aaKnown RBP17.55■□□□□ 0.4
NFIX-210ENST00000588228 SLC1A1P43005 524 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 RAB27AP51159 221 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 CLCN6P51797 869 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 ORC1Q13415 861 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 LPIN1Q14693 890 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 BRD3Q15059 726 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 CLUL1Q15846 466 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 SGO2Q562F6 1265 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 ERICH1Q86X53 443 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 PPP1R10Q96QC0 940 aaKnown RBP17.55■□□□□ 0.4
NFIX-210ENST00000588228 PNKPQ96T60 521 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 RBM12Q9NTZ6 932 aaKnown RBP17.55■□□□□ 0.4
NFIX-210ENST00000588228 RNF19AQ9NV58 838 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 GDAP2Q9NXN4 497 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.55■□□□□ 0.4
NFIX-210ENST00000588228 GIT1Q9Y2X7 761 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 TRIM17Q9Y577 477 aa17.55■□□□□ 0.4
NFIX-210ENST00000588228 CCDC151A5D8V7 595 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 O00370 1275 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 MICAL2O94851 1124 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 TAF6P49848 677 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 SOX4Q06945 474 aaPredicted RBP17.54■□□□□ 0.4
NFIX-210ENST00000588228 STILQ15468 1287 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 SV2CQ496J9 727 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 DCAF12L1Q5VU92 463 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 LLGL2Q6P1M3 1020 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 WDR93Q6P2C0 686 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 MRPL10Q7Z7H8 261 aaKnown RBP17.54■□□□□ 0.4
NFIX-210ENST00000588228 PHLDB2Q86SQ0 1253 aa17.54■□□□□ 0.4
NFIX-210ENST00000588228 UNC93AQ86WB7 457 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms