RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 CASP4P49662 377 aa25.26■■□□□ 1.63
CHAF1A-205ENST00000587580 DUSP4Q13115 394 aa25.26■■□□□ 1.63
CHAF1A-205ENST00000587580 SLC39A12Q504Y0 691 aa25.26■■□□□ 1.63
CHAF1A-205ENST00000587580 CEP135Q66GS9 1140 aa25.26■■□□□ 1.63
CHAF1A-205ENST00000587580 SMYD4Q8IYR2 804 aaPredicted RBP25.26■■□□□ 1.63
CHAF1A-205ENST00000587580 ELMOD1Q8N336 334 aa25.26■■□□□ 1.63
CHAF1A-205ENST00000587580 PLEKHO2Q8TD55 490 aa25.26■■□□□ 1.63
CHAF1A-205ENST00000587580 CRISPLD1Q9H336 500 aa25.26■■□□□ 1.63
CHAF1A-205ENST00000587580 HOOK1Q9UJC3 728 aaKnown RBP25.26■■□□□ 1.63
CHAF1A-205ENST00000587580 PRR33A8MZF0 331 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 GADD45BO75293 160 aaPredicted RBP25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 SMC2O95347 1197 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 PTPN2P17706 415 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 CENPPQ6IPU0 288 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 TRIM67Q6ZTA4 783 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 TMEM86AQ8N2M4 240 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 TOP6BLQ8N6T0 577 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 ATAD1Q8NBU5 361 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 ITFG1Q8TB96 612 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 ZNF516Q92618 1163 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 ERCC4Q92889 916 aaPredicted RBP25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 CORO1BQ9BR76 489 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 KCNK12Q9HB15 430 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 CDH7Q9ULB5 785 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 TECTAO75443 2155 aa25.25■■□□□ 1.63
CHAF1A-205ENST00000587580 LRRIQ3A6PVS8 624 aaPredicted RBP25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 KINO60870 393 aaKnown RBP25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 LAMP2P13473 410 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 SIGLEC14Q08ET2 396 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 PLD1Q13393 1074 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 ADGRF2Q8IZF7 708 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 TTC9BQ8N6N2 239 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 PARD3BQ8TEW8 1205 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 SMARCE1Q969G3 411 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 GSDMAQ96QA5 445 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 SMOC2Q9H3U7 446 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 DDX43Q9NXZ2 648 aaKnown RBP25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 CEP72Q9P209 647 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 IGSF9Q9P2J2 1179 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 FRMD4BQ9Y2L6 1034 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 SLC27A5Q9Y2P5 690 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 MRPS23Q9Y3D9 190 aaKnown RBP25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 PCDHA5Q9Y5H7 936 aa25.24■■□□□ 1.63
CHAF1A-205ENST00000587580 NR2F2P24468 414 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 CDR1P51861 262 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 MYL7Q01449 175 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 TSPY1Q01534 308 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 NFIL3Q16649 462 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 SLC5A9Q2M3M2 681 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 IQCEQ6IPM2 695 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 OSTM1Q86WC4 334 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 UBALD2Q8IYN6 164 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 DCP1BQ8IZD4 617 aaKnown RBP25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 SPATA18Q8TC71 538 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 ING5Q8WYH8 240 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 FGF13Q92913 245 aa25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 ZNF512Q96ME7 567 aaPredicted RBP25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 AVENQ9NQS1 362 aaPredicted RBP25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 ZFP37Q9Y6Q3 630 aaPredicted RBP25.23■■□□□ 1.63
CHAF1A-205ENST00000587580 TMEM221A6NGB7 291 aa25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 M0R296 226 aa25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 PHACTR2O75167 634 aa25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 CST3P01034 146 aaPredicted RBP25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 ALDH1A3P47895 512 aa25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 BIRC3Q13489 604 aa25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 TRPC3Q13507 836 aa25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 SOWAHAQ2M3V2 549 aa25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 ZNF658Q5TYW1 1059 aaPredicted RBP25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 LRRTM3Q86VH5 581 aa25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 RSAD2Q8WXG1 361 aa25.22■■□□□ 1.63
CHAF1A-205ENST00000587580 SOAT2O75908 522 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 ACAT1P24752 427 aaKnown RBP25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 AP3M2P53677 418 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 EPHB3P54753 998 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 SMARCB1Q12824 385 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 TDGQ13569 410 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 ZCWPW2Q504Y3 356 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 TDRD10Q5VZ19 366 aaKnown RBP25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 PDZD4Q76G19 769 aaPredicted RBP25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 DPH6Q7L8W6 267 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 NPAS3Q8IXF0 933 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 HS6ST3Q8IZP7 471 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 SPATA20Q8TB22 786 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 C2orf15Q8WU43 125 aaKnown RBP25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 SEPT5Q99719 369 aaPredicted RBP25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 ABI2Q9NYB9 513 aaPredicted RBP25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 HSFX1Q9UBD0 423 aa25.21■■□□□ 1.63
CHAF1A-205ENST00000587580 CEBPBP17676 345 aa25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 RPL13P26373 211 aaKnown RBP25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 PRCPP42785 496 aa25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 LHX1P48742 406 aa25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 MYL6P60660 151 aa25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 DLG4P78352 724 aa25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 CLDN10P78369 228 aa25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 MGAT5BQ3V5L5 792 aa25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 INTS6LQ5JSJ4 861 aaKnown RBP25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 PRSS36Q5K4E3 855 aa25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 CYP4A22Q5TCH4 519 aa25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 ELOA2Q8IYF1 753 aaPredicted RBP25.2■■□□□ 1.62
CHAF1A-205ENST00000587580 ST13P5Q8NFI4 369 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms