RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ELMSAN1Q6PJG2 1045 aa20.53■□□□□ 0.88
DDX39A-204ENST00000586558 FAM200AQ8TCP9 573 aa20.53■□□□□ 0.88
DDX39A-204ENST00000586558 SEMA4DQ92854 862 aa20.53■□□□□ 0.88
DDX39A-204ENST00000586558 PI4K2AQ9BTU6 479 aa20.53■□□□□ 0.88
DDX39A-204ENST00000586558 NDST4Q9H3R1 872 aa20.53■□□□□ 0.88
DDX39A-204ENST00000586558 TSPY26PQ9H489 355 aa20.53■□□□□ 0.88
DDX39A-204ENST00000586558 FAM124BQ9H5Z6 455 aaPredicted RBP20.53■□□□□ 0.88
DDX39A-204ENST00000586558 CBX8Q9HC52 389 aa20.53■□□□□ 0.88
DDX39A-204ENST00000586558 DPP7Q9UHL4 492 aa20.53■□□□□ 0.88
DDX39A-204ENST00000586558 GABRDO14764 452 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 GLUD1P00367 558 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 WARSP23381 471 aaKnown RBP20.52■□□□□ 0.88
DDX39A-204ENST00000586558 PCSK1P29120 753 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 CLCN4P51793 760 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 ZNF445P59923 1031 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 KRT31Q15323 416 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 VWA3BQ502W6 1294 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 MIIPQ5JXC2 388 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 SLC22A17Q8WUG5 538 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 KBTBD7Q8WVZ9 684 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 PABPC5Q96DU9 382 aaKnown RBP20.52■□□□□ 0.88
DDX39A-204ENST00000586558 BCO2Q9BYV7 579 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 HSD3B7Q9H2F3 369 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 CYP3A43Q9HB55 503 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 LIMA1Q9UHB6 759 aaKnown RBP20.52■□□□□ 0.88
DDX39A-204ENST00000586558 TSC2P49815 1807 aa20.52■□□□□ 0.88
DDX39A-204ENST00000586558 CDK11BP21127 795 aaKnown RBP20.51■□□□□ 0.87
DDX39A-204ENST00000586558 ASPAP45381 313 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 TPM4P67936 248 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 ROR1Q01973 937 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 KCNC3Q14003 757 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 CCDC85BQ15834 202 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-204ENST00000586558 CTC1Q2NKJ3 1217 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 TPGS2Q68CL5 300 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 SPOPLQ6IQ16 392 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 RSPO2Q6UXX9 243 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-204ENST00000586558 TMEM184AQ6ZMB5 413 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 TTC39CQ8N584 583 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 HDAC7Q8WUI4 952 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 RTP3Q9BQQ7 232 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 ACBD6Q9BR61 282 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 SNX25Q9H3E2 840 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 IGFLR1Q9H665 355 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 SMYD3Q9H7B4 428 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 APOBEC3GQ9HC16 384 aaKnown RBP20.51■□□□□ 0.87
DDX39A-204ENST00000586558 DDX43Q9NXZ2 648 aaKnown RBP20.51■□□□□ 0.87
DDX39A-204ENST00000586558 MAFFQ9ULX9 164 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 POLIQ9UNA4 740 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 HCFC2Q9Y5Z7 792 aa20.51■□□□□ 0.87
DDX39A-204ENST00000586558 ADAM12O43184 909 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 CPB1P15086 417 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 GTF2F1P35269 517 aaKnown RBP eCLIP20.5■□□□□ 0.876e-8■■■■■ 27.6
DDX39A-204ENST00000586558 TSPY1Q01534 308 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 ADAM15Q13444 863 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 LILRA6Q6PI73 481 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 SCARA5Q6ZMJ2 495 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 GBP6Q6ZN66 633 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 GLYCTKQ8IVS8 523 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 EHBP1Q8NDI1 1231 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 OR10T2Q8NGX3 314 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 ZNF461Q8TAF7 563 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 LMO3Q8TAP4 145 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 CASP10Q92851 521 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 NT5C1BQ96P26 610 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 INTS2Q9H0H0 1204 aaKnown RBP20.5■□□□□ 0.87
DDX39A-204ENST00000586558 PLEKHA4Q9H4M7 779 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 DZANK1Q9NVP4 752 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 TAB2Q9NYJ8 693 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 GCNT4Q9P109 453 aa20.5■□□□□ 0.87
DDX39A-204ENST00000586558 LRRC10BA6NIK2 292 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 PES1O00541 588 aaKnown RBP20.49■□□□□ 0.87
DDX39A-204ENST00000586558 TGM5O43548 720 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 ABLIM3O94929 683 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 TBXAS1P24557 533 aaPredicted RBP20.49■□□□□ 0.87
DDX39A-204ENST00000586558 GNL1P36915 607 aaPredicted RBP20.49■□□□□ 0.87
DDX39A-204ENST00000586558 SMARCB1Q12824 385 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 GPR17Q13304 367 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 SKIV2LQ15477 1246 aaKnown RBP20.49■□□□□ 0.87
DDX39A-204ENST00000586558 EXOC3L4Q17RC7 722 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 RTL10Q7L3V2 364 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 OSTM1Q86WC4 334 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 PALB2Q86YC2 1186 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 DCP1BQ8IZD4 617 aaKnown RBP20.49■□□□□ 0.87
DDX39A-204ENST00000586558 PPM1EQ8WY54 764 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 MRPL45Q9BRJ2 306 aaKnown RBP20.49■□□□□ 0.87
DDX39A-204ENST00000586558 ZCWPW1Q9H0M4 648 aa20.49■□□□□ 0.87
DDX39A-204ENST00000586558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.49■□□□□ 0.873e-6■■■■■ 28.8
DDX39A-204ENST00000586558 AFF4Q9UHB7 1163 aaKnown RBP20.49■□□□□ 0.87
DDX39A-204ENST00000586558 WDR27A2RRH5 827 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 GOLGA6L19H0YKK7 550 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 LRRN2O75325 713 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 GLP2RO95838 553 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 EPCAMP16422 314 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 ARPP19P56211 112 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 INCA1Q0VD86 236 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 LUZP1Q86V48 1076 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 UNC93AQ86WB7 457 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 VN1R2Q8NFZ6 395 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 OR6B3Q8NGW1 331 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 ELMO3Q96BJ8 720 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms