RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 RPP25Q9BUL9 199 aaKnown RBP12.13□□□□□ -0.47
ACTN4-209ENST00000586538 ZCWPW1Q9H0M4 648 aa12.13□□□□□ -0.47
ACTN4-209ENST00000586538 TRPV4Q9HBA0 871 aa12.13□□□□□ -0.47
ACTN4-209ENST00000586538 LTB4R2Q9NPC1 389 aa12.13□□□□□ -0.47
ACTN4-209ENST00000586538 OBP2AQ9NY56 170 aa12.13□□□□□ -0.47
ACTN4-209ENST00000586538 CEP72Q9P209 647 aa12.13□□□□□ -0.47
ACTN4-209ENST00000586538 CGNQ9P2M7 1197 aaKnown RBP12.13□□□□□ -0.47
ACTN4-209ENST00000586538 TCHHQ07283 1943 aa12.13□□□□□ -0.47
ACTN4-209ENST00000586538 MIA3Q5JRA6 1907 aa12.13□□□□□ -0.47
ACTN4-209ENST00000586538 ANK1P16157 1881 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 TSC2P49815 1807 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 ZNF233A6NK53 670 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 TULP1O00294 542 aaPredicted RBP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 ZNF263O14978 683 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 LAMTOR5O43504 91 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 PRPF40AO75400 957 aaKnown RBP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 TNNC2P02585 160 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 ZSCAN22P10073 491 aaPredicted RBP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 DDX6P26196 483 aaKnown RBP eCLIP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 PCSK1P29120 753 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 ADSSP30520 456 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 RPS9P46781 194 aaKnown RBP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 LHX1P48742 406 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 MLLT6P55198 1093 aaPredicted RBP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 ASIC1P78348 528 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 RBP5P82980 135 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 ZNF528Q3MIS6 628 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 FAM78AQ5JUQ0 283 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 CRELD2Q6UXH1 353 aaPredicted RBP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 TPRG1Q6ZUI0 275 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 HS2ST1Q7LGA3 356 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 CSGALNACT1Q8TDX6 532 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 NOC3LQ8WTT2 800 aaKnown RBP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 LEO1Q8WVC0 666 aaPredicted RBP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 PHOX2BQ99453 314 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 PANK2Q9BZ23 570 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 TRIM9Q9C026 710 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 KBTBD4Q9NVX7 518 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 UXTQ9UBK9 157 aaPredicted RBP12.12□□□□□ -0.47
ACTN4-209ENST00000586538 FBXO4Q9UKT5 387 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 PCDHB5Q9Y5E4 795 aa12.12□□□□□ -0.47
ACTN4-209ENST00000586538 DOCK6Q96HP0 2047 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 NOTCH4Q99466 2003 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 A0A1W2PRU2 124 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 PRR23AA6NEV1 266 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 FAM170BA6NMN3 283 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 SOBPA7XYQ1 873 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 TISP43B9A030 160 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 PPEF2O14830 753 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 SPTLC1O15269 473 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 F13A1P00488 732 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 ITGB3P05106 788 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 DCNP07585 359 aaKnown RBP12.11□□□□□ -0.47
ACTN4-209ENST00000586538 KRT19P08727 400 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 WEE1P30291 646 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 POLR2BP30876 1174 aaKnown RBP12.11□□□□□ -0.47
ACTN4-209ENST00000586538 ME1P48163 572 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 TEAD2Q15562 447 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 FAM26FQ5R3K3 315 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 TANGO2Q6ICL3 276 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 DPH6Q7L8W6 267 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 FRMD5Q7Z6J6 570 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 MFSD6LQ8IWD5 586 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 EFCAB13Q8IY85 973 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 CEP57L1Q8IYX8 460 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 CSGALNACT2Q8N6G5 542 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 TOP6BLQ8N6T0 577 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 ATAD1Q8NBU5 361 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 DHX58Q96C10 678 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 TCEAL4Q96EI5 215 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 SAAL1Q96ER3 474 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 ACBD6Q9BR61 282 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 FOXQ1Q9C009 403 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 ATXN3LQ9H3M9 355 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 ABCB6Q9NP58 842 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 SPATA6Q9NWH7 488 aaPredicted RBP12.11□□□□□ -0.47
ACTN4-209ENST00000586538 DLGAP2Q9P1A6 1054 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
ACTN4-209ENST00000586538 PVALEFA0A1B0GWK0 134 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 CHADO15335 359 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 PRPF6O94906 941 aaKnown RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 LMNAP02545 664 aaKnown RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 FCARP24071 287 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 GABRR2P28476 465 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 GDI1P31150 447 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 CCR2P41597 374 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 CASP5P51878 434 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 KCNA1Q09470 495 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 MAPRE1Q15691 268 aaKnown RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 E2F4Q16254 413 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 DUOXA2Q1HG44 320 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 ARHGAP29Q52LW3 1261 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 WSCD1Q658N2 575 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 UNC13DQ70J99 1090 aa12.1□□□□□ -0.47
ACTN4-209ENST00000586538 DNAJB7Q7Z6W7 309 aaPredicted RBP12.1□□□□□ -0.47
ACTN4-209ENST00000586538 TMC8Q8IU68 726 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms