RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 MTMR10Q9NXD2 777 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 MTRRQ9UBK8 725 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 POLIQ9UNA4 740 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 LAMA3Q16787 3333 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 SRGAP2BP0DMP2 458 aa15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 WARSP23381 471 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 KLRC2P26717 231 aa15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 UBXN1Q04323 297 aa15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 MRPL58Q14197 206 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 SCARA3Q6AZY7 606 aa15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 MICALL1Q8N3F8 863 aa15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 OR6B3Q8NGW1 331 aa15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 CRACR2AQ9BSW2 395 aa15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 MTCH2Q9Y6C9 303 aa15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 CHD9Q3L8U1 2897 aa15.61■□□□□ 0.09
SCAMP4-209ENST00000585335 HIDE1A8MVS5 230 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 NCK2O43639 380 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 LILRB3O75022 631 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 CNPP09543 421 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 CPB1P15086 417 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 GNL1P36915 607 aaPredicted RBP15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 ASPAP45381 313 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 LRMPQ12912 555 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 CUL2Q13617 745 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 ADGRE1Q14246 886 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 TRIM65Q6PJ69 517 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 ENOSF1Q7L5Y1 443 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 LIMS2Q7Z4I7 341 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 DCP1BQ8IZD4 617 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 PPM1KQ8N3J5 372 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 PCMTD1Q96MG8 357 aaPredicted RBP15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 KLHL5Q96PQ7 755 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 BCO2Q9BYV7 579 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 SMYD3Q9H7B4 428 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 APOBEC3GQ9HC16 384 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 DDX43Q9NXZ2 648 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 DPP7Q9UHL4 492 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 FBXL5Q9UKA1 691 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 CDY1Q9Y6F8 540 aa15.6■□□□□ 0.09
SCAMP4-209ENST00000585335 MYO9BQ13459 2157 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 VWA8A3KMH1 1905 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 TEX28O15482 410 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 CBFA2T2O43439 604 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 C1RP00736 705 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 RFX1P22670 979 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 PON1P27169 355 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 OR1D2P34982 312 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 NRIP1P48552 1158 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 MFAP3P55082 362 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 ARPP19P56211 112 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 FANCCQ00597 558 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 GCNT1Q02742 428 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 TCEAL5Q5H9L2 206 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 SLC8B1Q6J4K2 584 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 GLYCTKQ8IVS8 523 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 LMO3Q8TAP4 145 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 KBTBD7Q8WVZ9 684 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 TATDN2Q93075 761 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 ELMO3Q96BJ8 720 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 TNIP3Q96KP6 325 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 GUCD1Q96NT3 240 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 ACBD6Q9BR61 282 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 MRPL45Q9BRJ2 306 aaKnown RBP15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 APEX2Q9UBZ4 518 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 CDH9Q9ULB4 789 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 DAAM1Q9Y4D1 1078 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 PCDHGC5Q9Y5F6 944 aa15.59■□□□□ 0.09
SCAMP4-209ENST00000585335 A8MXQ7 604 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 GABRDO14764 452 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 GLUD1P00367 558 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 WEE2P0C1S8 567 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 RPL17P18621 184 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 CD58P19256 250 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 SLC9A1P19634 815 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 RAP1GAPP47736 663 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 UBASH3AP57075 661 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 SMARCB1Q12824 385 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 RAB33AQ14088 237 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 MAPRE1Q15691 268 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 DUSP6Q16828 381 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 ADGRD2Q7Z7M1 963 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 RBM23Q86U06 439 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 UNC93AQ86WB7 457 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 JAKMIP2Q96AA8 810 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 CLSTN3Q9BQT9 956 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 LSM14BQ9BX40 385 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 UBE2TQ9NPD8 197 aaPredicted RBP15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 RTN4Q9NQC3 1192 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 BARX2Q9UMQ3 279 aaPredicted RBP15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 TSC2P49815 1807 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 CHD7Q9P2D1 2997 aa15.58■□□□□ 0.08
SCAMP4-209ENST00000585335 A0A1B0GTH6 734 aa15.57■□□□□ 0.08
SCAMP4-209ENST00000585335 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
SCAMP4-209ENST00000585335 TBC1D4O60343 1298 aa15.57■□□□□ 0.08
SCAMP4-209ENST00000585335 CLASP2O75122 1294 aaKnown RBP15.57■□□□□ 0.08
SCAMP4-209ENST00000585335 LRRN2O75325 713 aa15.57■□□□□ 0.08
SCAMP4-209ENST00000585335 ELF1P32519 619 aa15.57■□□□□ 0.08
SCAMP4-209ENST00000585335 CDH8P55286 799 aa15.57■□□□□ 0.08
SCAMP4-209ENST00000585335 INCA1Q0VD86 236 aa15.57■□□□□ 0.08
SCAMP4-209ENST00000585335 SYCP1Q15431 976 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms