RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 GCNT3O95395 438 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 VNN2O95498 520 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CYP11A1P05108 521 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ADRB2P07550 413 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CCNE1P24864 410 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CDC25CP30307 473 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 DDIT3P35638 169 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 TUFMP49411 452 aaKnown RBP9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 KPNA1P52294 538 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 MTAPQ13126 283 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 POSTNQ15063 836 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 STXBP5Q5T5C0 1151 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 GPR158Q5T848 1215 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CENPPQ6IPU0 288 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 POTEHQ6S545 545 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 NT5DC4Q86YG4 428 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 TTC9BQ8N6N2 239 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ATAD1Q8NBU5 361 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 OR10T2Q8NGX3 314 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 SPPL2BQ8TCT7 592 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 C2orf15Q8WU43 125 aaKnown RBP9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 TMEM209Q96SK2 561 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 FIZ1Q96SL8 496 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 FAM126AQ9BYI3 521 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CHRDQ9H2X0 955 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ST6GALNAC4Q9H4F1 302 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 DPP3Q9NY33 737 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ABI2Q9NYB9 513 aaPredicted RBP9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 RAB23Q9ULC3 237 aa9.41□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ANO9A1A5B4 782 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 SLC38A8A6NNN8 435 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 PIRO00625 290 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CYB561D2O14569 222 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CHADO15335 359 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 SOAT2O75908 522 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 PDIA4P13667 645 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 IDEP14735 1019 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 GAP43P17677 238 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ATF6P18850 670 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 PNPLA4P41247 253 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 STAT6P42226 847 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 NRLP54845 237 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CYP4F8P98187 520 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 TSPY1Q01534 308 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 POU5F1Q01860 360 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CEBPZQ03701 1054 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 FCHO2Q0JRZ9 810 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 SMARCB1Q12824 385 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ALCAMQ13740 583 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ARHGAP29Q52LW3 1261 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 RRAGBQ5VZM2 374 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CCDC73Q6ZRK6 1079 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 SV2BQ7L1I2 683 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 DGLUCYQ7Z3D6 616 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 DNAJB7Q7Z6W7 309 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 EFCAB13Q8IY85 973 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 SYCP3Q8IZU3 236 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 DCLK2Q8N568 766 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 GPR161Q8N6U8 529 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 SUMF1Q8NBK3 374 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ZBTB44Q8NCP5 570 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 NOC3LQ8WTT2 800 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 RMDN1Q96DB5 314 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 EPSTI1Q96J88 318 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 IPO9Q96P70 1041 aaKnown RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 LPIN3Q9BQK8 851 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 FAM213AQ9BRX8 229 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 LRRC3Q9BY71 257 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 ZCWPW1Q9H0M4 648 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 EPC1Q9H2F5 836 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 C8orf33Q9H7E9 229 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 LMAN1LQ9HAT1 526 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 RBAKQ9NYW8 714 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 FBXO2Q9UK22 296 aaPredicted RBP9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 GMEB2Q9UKD1 530 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 CLIC4Q9Y696 253 aa9.4□□□□□ -0.9
CDK5RAP3-229ENST00000583697 DCHS1Q96JQ0 3298 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 KPNA7A9QM74 516 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ARNTLO00327 626 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 LILRB5O75023 590 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PPP1R37O75864 691 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 LDHAP00338 332 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ITGB3P05106 788 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 TMEM191BP0C7N4 346 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 MLLT6P55198 1093 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 TFAMQ00059 246 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PLCB2Q00722 1185 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 BFSP1Q12934 665 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 PUM1Q14671 1186 aaKnown RBP eCLIP9.39□□□□□ -0.912e-9■■□□□ 12.1
CDK5RAP3-229ENST00000583697 L1TD1Q5T7N2 865 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 STXBP4Q6ZWJ1 553 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ZNF720Q7Z2F6 126 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 RALGPS2Q86X27 583 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ARID3BQ8IVW6 561 aaPredicted RBP9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 BRSK2Q8IWQ3 736 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 DCP1BQ8IZD4 617 aaKnown RBP9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 BPIFB1Q8TDL5 484 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 SAAL1Q96ER3 474 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 ACCSQ96QU6 501 aa9.39□□□□□ -0.91
CDK5RAP3-229ENST00000583697 OLFML3Q9NRN5 406 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms