RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 A6NNZ2 444 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 H3BNC9 293 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 FOXN3O00409 490 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 RPL17P18621 184 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 RAB1AP62820 205 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 SIM1P81133 766 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 ATP8B2P98198 1209 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 MTM1Q13496 603 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 FGL2Q14314 439 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 ZNF169Q14929 603 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 POLD3Q15054 466 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 VPS72Q15906 364 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 KIAA0753Q2KHM9 967 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 LONRF3Q496Y0 759 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 METTL24Q5JXM2 366 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 SYCP2LQ5T4T6 812 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 MAEAQ7L5Y9 396 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 HEATR3Q7Z4Q2 680 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 OR5M3Q8NGP4 307 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 LRTOMTQ8WZ04 291 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 SLC35A4Q96G79 324 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 RPS6KC1Q96S38 1066 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 ALOXE3Q9BYJ1 711 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 NUP62CLQ9H1M0 184 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 EPC1Q9H2F5 836 aa4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 SIDT1Q9NXL6 827 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 ARID4BQ4LE39 1312 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-209ENST00000583441 B5MCH6 92 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 PRR23D1E9PI22 279 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 H3BUI4 141 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 PMM2O15305 246 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 PJA2O43164 708 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 PHGDHO43175 533 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 AMY1AP04745 511 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 PRR23D2P0DMB1 279 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 MYBP10242 640 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 TYRP14679 529 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 MALP21145 153 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 PEX2P28328 305 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 CASRP41180 1078 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 RARRES1P49788 294 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 CACNA2D1P54289 1103 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 NKX6-1P78426 367 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 APBA1Q02410 837 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 CREMQ03060 361 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 SEMA5AQ13591 1074 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 TP53BP2Q13625 1128 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 LLGL1Q15334 1064 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 CNN3Q15417 329 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 EZH2Q15910 746 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 KHDC1Q4VXA5 237 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 FAM47AQ5JRC9 791 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 PRAMEF14Q5SWL7 426 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 RNF220Q5VTB9 566 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 OTUD7BQ6GQQ9 843 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 ZNF788Q6ZQV5 615 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 PLXDC1Q8IUK5 500 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 KRT78Q8N1N4 520 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 BRIX1Q8TDN6 353 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 ASB10Q8WXI3 467 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 LRRC27Q9C0I9 530 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 BTBD1Q9H0C5 482 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 ENKD1Q9H0I2 346 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 SARS2Q9NP81 518 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 PNPOQ9NVS9 261 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 FAM50BQ9Y247 325 aa4.64□□□□□ -1.67
SMCHD1-209ENST00000583441 A0A1W2PPL8 197 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 SERINC4A6NH21 518 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 APAF1O14727 1248 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 EIF3JO75822 258 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 HLA-DOAP06340 250 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 SNRPA1P09661 255 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 EGR2P11161 476 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 MTHFD1P11586 935 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 ALOX15P16050 662 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 DDX6P26196 483 aaKnown RBP eCLIP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 CCT4P50991 539 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 IFIT5Q13325 482 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 MRPL49Q13405 166 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 FAM214AQ32MH5 1076 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 DACT2Q5SW24 774 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 ZGPATQ8N5A5 531 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 ZBTB8BQ8NAP8 495 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 MDM1Q8TC05 714 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 MORC4Q8TE76 937 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 PMM1Q92871 262 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 TNIP3Q96KP6 325 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 DMRTA2Q96SC8 542 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 MPHOSPH6Q99547 160 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 ELAC2Q9BQ52 826 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 C11orf54Q9H0W9 315 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 RNF181Q9P0P0 153 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 ABCF2Q9UG63 623 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 CLCA2Q9UQC9 943 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 PAXBP1Q9Y5B6 917 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 PCDHA3Q9Y5H8 950 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 MAST3O60307 1309 aa4.63□□□□□ -1.67
SMCHD1-209ENST00000583441 CFAP69A5D8W1 941 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 PLEKHD1A6NEE1 506 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 LRRC14BA6NHZ5 514 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms