RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ABCF2Q9UG63 623 aa5.27□□□□□ -1.57
COPS3-217ENST00000583160 AGAP1Q9UPQ3 857 aa5.27□□□□□ -1.57
COPS3-217ENST00000583160 ENTPD2Q9Y5L3 495 aa5.27□□□□□ -1.57
COPS3-217ENST00000583160 SPATA31A3Q5VYP0 1347 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 FNDC1Q4ZHG4 1894 aaPredicted RBP5.26□□□□□ -1.57
COPS3-217ENST00000583160 A0A0B4J269 797 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 PROP1O75360 226 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 IL33O95760 270 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 CHEK2O96017 543 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 FTLP02792 175 aaPredicted RBP5.26□□□□□ -1.57
COPS3-217ENST00000583160 RARBP10826 455 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 NDUFV1P49821 464 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 HK3P52790 923 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 TUBB3Q13509 450 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 KIF22Q14807 665 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 PTPROQ16827 1216 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 TMEM240Q5SV17 173 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 HEATR3Q7Z4Q2 680 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 CPA6Q8N4T0 437 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 TNPO1Q92973 898 aaKnown RBP5.26□□□□□ -1.57
COPS3-217ENST00000583160 RGMAQ96B86 450 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 TIMP4Q99727 224 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 CNPPD1Q9BV87 410 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 SMOC2Q9H3U7 446 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 CPNE5Q9HCH3 593 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 KLC4Q9NSK0 619 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 MRPS18AQ9NVS2 196 aaKnown RBP5.26□□□□□ -1.57
COPS3-217ENST00000583160 ARPP21Q9UBL0 812 aaPredicted RBP5.26□□□□□ -1.57
COPS3-217ENST00000583160 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.26□□□□□ -1.57
COPS3-217ENST00000583160 LUC7L2Q9Y383 392 aaKnown RBP5.26□□□□□ -1.57
COPS3-217ENST00000583160 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.26□□□□□ -1.57
COPS3-217ENST00000583160 NR2E3Q9Y5X4 410 aa5.26□□□□□ -1.57
COPS3-217ENST00000583160 VWC2LB2RUY7 222 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 TRIAP1O43715 76 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 VPS4BO75351 444 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 KIF20AO95235 890 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 MAP2K6P52564 334 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 TSTD2Q5T7W7 516 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 TAF2Q6P1X5 1199 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 CATIPQ7Z7H3 387 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 USP37Q86T82 979 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 ZBTB46Q86UZ6 589 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 SH2D3CQ8N5H7 860 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 PSD4Q8NDX1 1056 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 CHMP4CQ96CF2 233 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 HSPBAP1Q96EW2 488 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 TPSD1Q9BZJ3 242 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 AMBRA1Q9C0C7 1298 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 SIK2Q9H0K1 926 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 MRPL46Q9H2W6 279 aaKnown RBP5.25□□□□□ -1.57
COPS3-217ENST00000583160 LMBRD1Q9NUN5 540 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 FEZ2Q9UHY8 353 aaPredicted RBP5.25□□□□□ -1.57
COPS3-217ENST00000583160 ZDHHC8Q9ULC8 765 aa5.25□□□□□ -1.57
COPS3-217ENST00000583160 ADGRA2Q96PE1 1338 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 WDR27A2RRH5 827 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 LINC00473A8K010 186 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 RBMXL2O75526 392 aaKnown RBP5.24□□□□□ -1.57
COPS3-217ENST00000583160 SOAT2O75908 522 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 WT1P19544 449 aaPredicted RBP5.24□□□□□ -1.57
COPS3-217ENST00000583160 CHRM3P20309 590 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 PGS1Q32NB8 556 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 ZKSCAN2Q63HK3 967 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 OSBPL9Q96SU4 736 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 BRINP2Q9C0B6 783 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 PNPOQ9NVS9 261 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 ST3GAL5Q9UNP4 418 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 FRMD4BQ9Y2L6 1034 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 PCDHA1Q9Y5I3 950 aa5.24□□□□□ -1.57
COPS3-217ENST00000583160 GNAI2P04899 355 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 RHOP08100 348 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 TYRP14679 529 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 ITGALP20701 1170 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 GPD1P21695 349 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 IBSPP21815 317 aaPredicted RBP5.23□□□□□ -1.57
COPS3-217ENST00000583160 TOB1P50616 345 aaPredicted RBP5.23□□□□□ -1.57
COPS3-217ENST00000583160 PPP1R3BQ86XI6 285 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 DDX17Q92841 729 aaKnown RBP5.23□□□□□ -1.57
COPS3-217ENST00000583160 FAM167AQ96KS9 214 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 HAPLN3Q96S86 360 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 GTPBP4Q9BZE4 634 aaKnown RBP5.23□□□□□ -1.57
COPS3-217ENST00000583160 TINAGL1Q9GZM7 467 aaPredicted RBP5.23□□□□□ -1.57
COPS3-217ENST00000583160 KMT5AQ9NQR1 393 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 RAD54BQ9Y620 910 aa5.23□□□□□ -1.57
COPS3-217ENST00000583160 M0QYG6 137 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 AHSGP02765 367 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 NR2F6P10588 404 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 AKAP5P24588 427 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 LMO1P25800 156 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 NEK2P51955 445 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 SOX10P56693 466 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 EXOSC10Q01780 885 aaKnown RBP5.22□□□□□ -1.57
COPS3-217ENST00000583160 TCF15Q12870 199 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 FAM153CQ494X1 144 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 CCDC157Q569K6 752 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 RBM20Q5T481 1227 aaKnown RBP5.22□□□□□ -1.57
COPS3-217ENST00000583160 ZNF788Q6ZQV5 615 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 SARAFQ96BY9 339 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 MVB12AQ96EY5 273 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 GPATCH3Q96I76 525 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 PBKQ96KB5 322 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms