RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	RUVBL1	Q9Y265	456 aa	Known RBP	4.01	□□□□□ -1.77
MSI2-215	ENST00000582453	ATP11B	Q9Y2G3	1177 aa		4.01	□□□□□ -1.77
MSI2-215	ENST00000582453	LUC7L2	Q9Y383	392 aa	Known RBP	4.01	□□□□□ -1.77
MSI2-215	ENST00000582453	USP15	Q9Y4E8	981 aa	Predicted RBP	4.01	□□□□□ -1.77
MSI2-215	ENST00000582453	HS3ST4	Q9Y661	456 aa		4.01	□□□□□ -1.77
MSI2-215	ENST00000582453	FPGT-TNNI3K	V9GXZ4	949 aa		4.01	□□□□□ -1.77
MSI2-215	ENST00000582453	CHD2	O14647	1828 aa	Known RBP	4	□□□□□ -1.77
MSI2-215	ENST00000582453	TMEM200C	A6NKL6	621 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	MARCH11	A6NNE9	402 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	PRPF3	O43395	683 aa	Known RBP	4	□□□□□ -1.77
MSI2-215	ENST00000582453	TOM1	O60784	492 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	DTNB	O60941	627 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	NCR1	O76036	304 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	ABHD16A	O95870	558 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	VCAM1	P19320	739 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	GCSH	P23434	173 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	ZFP36	P26651	326 aa	Known RBP	4	□□□□□ -1.77
MSI2-215	ENST00000582453	MXRA7	P84157	204 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	KLF10	Q13118	480 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	IL10RA	Q13651	578 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	FHL2	Q14192	279 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	BEAN1	Q3B7T3	259 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	ARMC6	Q6NXE6	501 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	UBE3B	Q7Z3V4	1068 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	TTC7B	Q86TV6	843 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	ZFPM1	Q8IX07	1006 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	CCDC146	Q8IYE0	955 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	CHPF	Q8IZ52	775 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	MYO1H	Q8N1T3	1032 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	MAGEB6	Q8N7X4	407 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	DCBLD1	Q8N8Z6	715 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	TTC8	Q8TAM2	541 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	PROKR1	Q8TCW9	393 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	NSUN6	Q8TEA1	469 aa	Known RBP	4	□□□□□ -1.77
MSI2-215	ENST00000582453	LARP4B	Q92615	738 aa	Known RBP	4	□□□□□ -1.77
MSI2-215	ENST00000582453	RAB24	Q969Q5	203 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	SLC39A13	Q96H72	371 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	MRGPRX4	Q96LA9	322 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	PRAM1	Q96QH2	718 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	NUP88	Q99567	741 aa	Predicted RBP	4	□□□□□ -1.77
MSI2-215	ENST00000582453	PRRX2	Q99811	253 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	RNPEP	Q9H4A4	650 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	KLHL11	Q9NVR0	708 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	FBXO34	Q9NWN3	711 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	PCDHB1	Q9Y5F3	818 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	MST1R	Q04912	1400 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	BRD4	O60885	1362 aa	Predicted RBP	4	□□□□□ -1.77
MSI2-215	ENST00000582453	USP47	Q96K76	1375 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	PLEKHH1	Q9ULM0	1364 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	NINL	Q9Y2I6	1382 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	MYO5B	Q9ULV0	1848 aa		4	□□□□□ -1.77
MSI2-215	ENST00000582453	KIAA0391	O15091	583 aa	Known RBP	3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	HAUS5	O94927	633 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	SLPI	P03973	132 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	CFI	P05156	583 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	MTHFD1	P11586	935 aa	Known RBP	3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	ATF3	P18847	181 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	SLC6A2	P23975	617 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	TLE1	Q04724	770 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	PABPC1L	Q4VXU2	614 aa	Known RBP	3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	TSHZ3	Q63HK5	1081 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	KCNV1	Q6PIU1	500 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	GADL1	Q6ZQY3	521 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	C14orf80	Q86SX3	495 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	MAPKAPK5	Q8IW41	473 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	WDR75	Q8IWA0	830 aa	Known RBP	3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	ULK2	Q8IYT8	1036 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	FITM2	Q8N6M3	262 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	FBXO41	Q8TF61	875 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	NEU4	Q8WWR8	484 aa	Predicted RBP	3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	KAT5	Q92993	513 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	HSPBAP1	Q96EW2	488 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	CLPTM1L	Q96KA5	538 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	TESK2	Q96S53	571 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	TEX101	Q9BY14	249 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	GSTO2	Q9H4Y5	243 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	MAN1C1	Q9NR34	630 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	AASDHPPT	Q9NRN7	309 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	DKK2	Q9UBU2	259 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	ZNF180	Q9UJW8	692 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	TULP4	Q9NRJ4	1543 aa		3.99	□□□□□ -1.77
MSI2-215	ENST00000582453	C1orf167	Q5SNV9	1468 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	EVC2	Q86UK5	1308 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	CENPVL1	A0A0U1RR11	272 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453		A0A1B0GTW7	788 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	TCRBV7S2A1N4T	A0A589	114 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	GRM6	O15303	877 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	SLC16A6	O15403	523 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	NDUFA10	O95299	355 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	ARIH2	O95376	493 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	IL33	O95760	270 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	POU2F2	P09086	479 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	CKB	P12277	381 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	PDC	P20941	246 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	AKAP5	P24588	427 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	DDX6	P26196	483 aa	Known RBP eCLIP	3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	FXR1	P51114	621 aa	Known RBP eCLIP	3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	DSC2	Q02487	901 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	PTPA	Q15257	358 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	THEMIS2	Q5TEJ8	643 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms