RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 NDST1P52848 882 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 ERVK-21P61565 698 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 SMAD3P84022 425 aaKnown RBP10.19□□□□□ -0.78
RFFL-210ENST00000582308 ZBED6P86452 979 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 PLCB3Q01970 1234 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 INCA1Q0VD86 236 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 ELAVL2Q12926 359 aaKnown RBP10.19□□□□□ -0.78
RFFL-210ENST00000582308 TRIM14Q14142 442 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 RAB30Q15771 203 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 PDXDC1Q6P996 788 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 CACNA2D4Q7Z3S7 1137 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 DDX53Q86TM3 631 aaKnown RBP10.19□□□□□ -0.78
RFFL-210ENST00000582308 FAM71AQ8IYT1 594 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 TMEM86AQ8N2M4 240 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 IQCDQ96DY2 449 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 TMEM169Q96HH4 297 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 TWNKQ96RR1 684 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 TGS1Q96RS0 853 aaKnown RBP10.19□□□□□ -0.78
RFFL-210ENST00000582308 RTP3Q9BQQ7 232 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 PLVAPQ9BX97 442 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 HMGXB4Q9UGU5 601 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 DSEQ9UL01 958 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 BARX2Q9UMQ3 279 aaPredicted RBP10.19□□□□□ -0.78
RFFL-210ENST00000582308 COLQQ9Y215 455 aaPredicted RBP10.19□□□□□ -0.78
RFFL-210ENST00000582308 LUC7L2Q9Y383 392 aaKnown RBP10.19□□□□□ -0.78
RFFL-210ENST00000582308 RWDD3Q9Y3V2 267 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 PCDHB4Q9Y5E5 795 aa10.19□□□□□ -0.78
RFFL-210ENST00000582308 MTCL1Q9Y4B5 1905 aaKnown RBP10.18□□□□□ -0.78
RFFL-210ENST00000582308 CYP26A1O43174 497 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 CILPO75339 1184 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 OAZ2O95190 189 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 CALCAP01258 141 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 SOD2P04179 222 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 RB1P06400 928 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 PDGFRBP09619 1106 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 KRT5P13647 590 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 DNAJB2P25686 324 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 KRT9P35527 623 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 SOX5P35711 763 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 USP8P40818 1118 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 LHX1P48742 406 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 ZNF132P52740 706 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 RAD23BP54727 409 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 ADKP55263 362 aaKnown RBP10.18□□□□□ -0.78
RFFL-210ENST00000582308 YWHAEP62258 255 aaKnown RBP10.18□□□□□ -0.78
RFFL-210ENST00000582308 ORC1Q13415 861 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 MRPL58Q14197 206 aaKnown RBP10.18□□□□□ -0.78
RFFL-210ENST00000582308 USP41Q3LFD5 358 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 RTP2Q5QGT7 225 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 VARS2Q5ST30 1063 aaKnown RBP10.18□□□□□ -0.78
RFFL-210ENST00000582308 KIAA0319Q5VV43 1072 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 E4F1Q66K89 784 aaPredicted RBP10.18□□□□□ -0.78
RFFL-210ENST00000582308 TMEM270Q6UE05 265 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.18□□□□□ -0.78
RFFL-210ENST00000582308 METTL23Q86XA0 190 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 CEP57Q86XR8 500 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 GPIHBP1Q8IV16 184 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 TC2NQ8N9U0 490 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 OR6B3Q8NGW1 331 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 SPATA18Q8TC71 538 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 SPPL3Q8TCT6 385 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 PDLIM2Q96JY6 352 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 SAMD11Q96NU1 681 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 SPAG5Q96R06 1193 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 TTPALQ9BTX7 342 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 HERC2P3Q9BVR0 1158 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 ELOVL4Q9GZR5 314 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 SNX25Q9H3E2 840 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 FAM124BQ9H5Z6 455 aaPredicted RBP10.18□□□□□ -0.78
RFFL-210ENST00000582308 ALG13Q9NP73 1137 aaKnown RBP10.18□□□□□ -0.78
RFFL-210ENST00000582308 ACP6Q9NPH0 428 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 CHST7Q9NS84 486 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 IMPACTQ9P2X3 320 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 MTUS1Q9ULD2 1270 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 MYO6Q9UM54 1294 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 STXBP5LQ9Y2K9 1186 aa10.18□□□□□ -0.78
RFFL-210ENST00000582308 A0A1W2PPC1 479 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 ARHGEF37A1IGU5 675 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 LRRC53A6NM62 1247 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 AKR1B15C9JRZ8 316 aaPredicted RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 TBC1D4O60343 1298 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 LILRB3O75022 631 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 MFAP3LO75121 409 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 ATP2C2O75185 946 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 GFPT2O94808 682 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 TPM1P09493 284 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 ACAT1P24752 427 aaKnown RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 DNAJB1P25685 340 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 CLCN1P35523 988 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 STAT1P42224 750 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 DSG1Q02413 1049 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 ARID5AQ03989 594 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 KRT17Q04695 432 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 YWHAHQ04917 246 aaPredicted RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 ARID5BQ14865 1188 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 LRIT3Q3SXY7 679 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 ZNF394Q53GI3 561 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 PPP2R2DQ66LE6 453 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 SMYD5Q6GMV2 418 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 OVOS1Q6IE37 1185 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms