RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 HAS3O00219 553 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 PROSCO94903 275 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 PGK1P00558 417 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 MARCKSL1P49006 195 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 PSEN2P49810 448 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 DR1Q01658 176 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 SCARA5Q6ZMJ2 495 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 C1orf127Q8N9H9 656 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 BCO2Q9BYV7 579 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 CYP3A43Q9HB55 503 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 HMX1Q9NP08 348 aaPredicted RBP24.07■■□□□ 1.44
CCDC47-204ENST00000582252 SETD4Q9NVD3 440 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 NXF1Q9UBU9 619 aaKnown RBP24.07■■□□□ 1.44
CCDC47-204ENST00000582252 ITGA11Q9UKX5 1188 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 RALGAPA2Q2PPJ7 1873 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 SMIM35A0A1B0GVV1 85 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 CSDE1O75534 798 aaKnown RBP24.06■■□□□ 1.44
CCDC47-204ENST00000582252 PAEPP09466 180 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 MMP8P22894 467 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 EIF4BP23588 611 aaKnown RBP24.06■■□□□ 1.44
CCDC47-204ENST00000582252 GRM5P41594 1212 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 TAP1Q03518 808 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 PTP4A2Q12974 167 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 MMS22LQ6ZRQ5 1243 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 SLC13A5Q86YT5 568 aaPredicted RBP24.06■■□□□ 1.44
CCDC47-204ENST00000582252 TTC39CQ8N584 583 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 MTG1Q9BT17 334 aaPredicted RBP24.06■■□□□ 1.44
CCDC47-204ENST00000582252 CITO14578 2027 aa24.06■■□□□ 1.44
CCDC47-204ENST00000582252 TTI1O43156 1089 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 PSTPIP1O43586 416 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 OPA1O60313 960 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 ITGB3P05106 788 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 WEE2P0C1S8 567 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 SMIM10L2AP0DMW4 78 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 SMIM10L2BP0DMW5 78 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 PYGMP11217 842 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 CST5P28325 142 aaPredicted RBP24.05■■□□□ 1.44
CCDC47-204ENST00000582252 CDH5P33151 784 aaPredicted RBP24.05■■□□□ 1.44
CCDC47-204ENST00000582252 MAN1A1P33908 653 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 FEZF2Q8TBJ5 459 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 SEC14L1Q92503 715 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 PLEKHA4Q9H4M7 779 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 SIX4Q9UIU6 781 aa24.05■■□□□ 1.44
CCDC47-204ENST00000582252 CFHP08603 1231 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 BRD2P25440 801 aaKnown RBP24.04■■□□□ 1.44
CCDC47-204ENST00000582252 MAMLD1Q13495 774 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 SLC10A6Q3KNW5 377 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 WDR72Q3MJ13 1102 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 LRRC45Q96CN5 670 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 IP6K2Q9UHH9 426 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 PTPN22Q9Y2R2 807 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 STAU1O95793 577 aaKnown RBP24.04■■□□□ 1.44
CCDC47-204ENST00000582252 POLR2BP30876 1174 aaKnown RBP24.04■■□□□ 1.44
CCDC47-204ENST00000582252 GBP1P32455 592 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 ZNF394Q53GI3 561 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 SCARA3Q6AZY7 606 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 ADAT2Q7Z6V5 191 aaKnown RBP24.04■■□□□ 1.44
CCDC47-204ENST00000582252 RHOT1Q8IXI2 618 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 KLHDC9Q8NEP7 349 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 PLEKHA5Q9HAU0 1116 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 PRDM10Q9NQV6 1147 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 VPS18Q9P253 973 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 STRIP2Q9ULQ0 834 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 DERAQ9Y315 318 aa24.04■■□□□ 1.44
CCDC47-204ENST00000582252 PODXLO00592 558 aa24.03■■□□□ 1.44
CCDC47-204ENST00000582252 TLR3O15455 904 aaKnown RBP24.03■■□□□ 1.44
CCDC47-204ENST00000582252 CYP2C9P11712 490 aa24.03■■□□□ 1.44
CCDC47-204ENST00000582252 RBP5P82980 135 aa24.03■■□□□ 1.44
CCDC47-204ENST00000582252 CYP1B1Q16678 543 aa24.03■■□□□ 1.44
CCDC47-204ENST00000582252 CATSPER4Q7RTX7 472 aa24.03■■□□□ 1.44
CCDC47-204ENST00000582252 PCSK9Q8NBP7 692 aaKnown RBP24.03■■□□□ 1.44
CCDC47-204ENST00000582252 MAGOHBQ96A72 148 aaKnown RBP24.03■■□□□ 1.44
CCDC47-204ENST00000582252 ADAMTS10Q9H324 1103 aa24.03■■□□□ 1.44
CCDC47-204ENST00000582252 PCYOX1Q9UHG3 505 aa24.03■■□□□ 1.44
CCDC47-204ENST00000582252 POLIQ9UNA4 740 aa24.03■■□□□ 1.44
CCDC47-204ENST00000582252 MBLAC1A4D2B0 266 aaPredicted RBP24.02■■□□□ 1.44
CCDC47-204ENST00000582252 SYF2O95926 243 aaKnown RBP24.02■■□□□ 1.44
CCDC47-204ENST00000582252 AXLP30530 894 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 GGCXP38435 758 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 CETN2P41208 172 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 FNTAP49354 379 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 KIZQ2M2Z5 673 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 CFAP58Q5T655 872 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 DNAJC24Q6P3W2 148 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 SLC27A1Q6PCB7 646 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 RNF180Q86T96 592 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 C1orf131Q8NDD1 294 aaKnown RBP24.02■■□□□ 1.44
CCDC47-204ENST00000582252 FAM49AQ9H0Q0 323 aaPredicted RBP24.02■■□□□ 1.44
CCDC47-204ENST00000582252 LHX5Q9H2C1 402 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 ERVK-5Q9HDB9 667 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 FAN1Q9Y2M0 1017 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 NR2E1Q9Y466 385 aa24.02■■□□□ 1.44
CCDC47-204ENST00000582252 GOLGA8KD6RF30 607 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 CD19P15391 556 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 SSTR3P32745 418 aaPredicted RBP24.01■■□□□ 1.43
CCDC47-204ENST00000582252 AADACL2Q6P093 401 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 NOTUMQ6P988 496 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 CXCL17Q6UXB2 119 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 ERICH1Q86X53 443 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 PRELID2Q8N945 189 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms