RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	GLIS3	Q8NEA6	775 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CXorf38	Q8TB03	319 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SPPL2B	Q8TCT7	592 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	HPS3	Q969F9	1004 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CCDC47	Q96A33	483 aa	Known RBP	13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SHD	Q96IW2	340 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CORO1B	Q9BR76	489 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	BLZF1	Q9H2G9	400 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PDE11A	Q9HCR9	933 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ASAH2	Q9NR71	780 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	EXOC1	Q9NV70	894 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SERTAD1	Q9UHV2	236 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ZMYM5	Q9UJ78	669 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	KMT2E	Q8IZD2	1858 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708		A0A1B0GVL5	298 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	POLR2B	P30876	1174 aa	Known RBP	13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	LHX1	P48742	406 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TSPY1	Q01534	308 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PSMD6	Q15008	389 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	WSCD1	Q658N2	575 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PARM1	Q6UWI2	310 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CBWD2	Q8IUF1	395 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SLC9A9	Q8IVB4	645 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CSGALNACT2	Q8N6G5	542 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	RSAD2	Q8WXG1	361 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	FGF14	Q92915	247 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PSMG2	Q969U7	264 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	E2F7	Q96AV8	911 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ELSPBP1	Q96BH3	223 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ACBD6	Q9BR61	282 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SMOC2	Q9H3U7	446 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TRPV4	Q9HBA0	871 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ABCB6	Q9NP58	842 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SLC39A2	Q9NP94	309 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CEP72	Q9P209	647 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	WDFY4	Q6ZS81	3184 aa		13.55	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TCHH	Q07283	1943 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	KLRC4	O43908	158 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	VNN2	O95498	520 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	OR4Q2	P0C623	313 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	AOC1	P19801	751 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	AP3M2	P53677	418 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	WNT7B	P56706	349 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	MYL7	Q01449	175 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	VEPH1	Q14D04	833 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SLC5A9	Q2M3M2	681 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SLC39A12	Q504Y0	691 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	LIMS2	Q7Z4I7	341 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SIX5	Q8N196	739 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TMEM130	Q8N3G9	435 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PDCL2	Q8N4E4	241 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ZSWIM2	Q8NEG5	633 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	OR10T2	Q8NGX3	314 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	FNBP1	Q96RU3	617 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	MTMR12	Q9C0I1	747 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SIX4	Q9UIU6	781 aa		13.54	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SOBP	A7XYQ1	873 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PDXK	O00764	312 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	GALR2	O43603	387 aa	Predicted RBP	13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NARS	O43776	548 aa	Known RBP	13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	STAU1	O95793	577 aa	Known RBP	13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PDGFB	P01127	241 aa	Predicted RBP	13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CFH	P08603	1231 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	KRT19	P08727	400 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NPR3	P17342	541 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CEBPB	P17676	345 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PCSK1	P29120	753 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CASP1	P29466	404 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	WEE1	P30291	646 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NDUFA8	P51970	172 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	VCP	P55072	806 aa	Known RBP	13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NHLH1	Q02575	133 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PRKCQ	Q04759	706 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CYP24A1	Q07973	514 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NELFCD	Q8IXH7	590 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ATAD1	Q8NBU5	361 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	GPR152	Q8TDT2	470 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NOC3L	Q8WTT2	800 aa	Known RBP	13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	MCRS1	Q96EZ8	462 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	HPDL	Q96IR7	371 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CEP295NL	Q96MC4	621 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ASB16	Q96NS5	453 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PGLYRP2	Q96PD5	576 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CGRRF1	Q99675	332 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	LRRC3	Q9BY71	257 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	DNAJC25	Q9H1X3	360 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CRISPLD1	Q9H336	500 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ZFP14	Q9HCL3	533 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ARHGEF3	Q9NR81	526 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PCDHB5	Q9Y5E4	795 aa		13.53	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	GABRD	O14764	452 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	EXOC3	O60645	756 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	RHOBTB3	O94955	611 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	RPN1	P04843	607 aa	Known RBP	13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	TNNI1	P19237	187 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	ATIC	P31939	592 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CCR2	P41597	374 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	STARD6	P59095	220 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	GPC5	P78333	572 aa		13.52	□□□□□ -0.25
CDK5RAP3-222	ENST00000581708	CLDN10	P78369	228 aa		13.52	□□□□□ -0.25

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