RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 GBP6Q6ZN66 633 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 GAS2L3Q86XJ1 694 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 ADGRF2Q8IZF7 708 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 CCDC150Q8NCX0 1101 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 MMS19Q96T76 1030 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 MRPL45Q9BRJ2 306 aaKnown RBP16.18■□□□□ 0.18
MKS1-210ENST00000581180 CRACR2AQ9BSW2 395 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 NIF3L1Q9GZT8 377 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 GCNT4Q9P109 453 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 FBXL5Q9UKA1 691 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 NME7Q9Y5B8 376 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 DOCK6Q96HP0 2047 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 LGALS16A8MUM7 142 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 TEX28O15482 410 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 ADAM12O43184 909 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 CLASP2O75122 1294 aaKnown RBP16.17■□□□□ 0.18
MKS1-210ENST00000581180 P4HA1P13674 534 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 SLC9A1P19634 815 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 IGFBP4P22692 258 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 PON1P27169 355 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 CDH8P55286 799 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 TPM4P67936 248 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 CREMQ03060 361 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 DUSP6Q16828 381 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 EXOC3L4Q17RC7 722 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 CTXN3Q4LDR2 81 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 TCEAL5Q5H9L2 206 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 SLC8B1Q6J4K2 584 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 METTL23Q86XA0 190 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 RNF214Q8ND24 703 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 ANP32EQ9BTT0 268 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 OXCT2Q9BYC2 517 aaPredicted RBP16.17■□□□□ 0.18
MKS1-210ENST00000581180 INTS2Q9H0H0 1204 aaKnown RBP16.17■□□□□ 0.18
MKS1-210ENST00000581180 CYP3A43Q9HB55 503 aa16.17■□□□□ 0.18
MKS1-210ENST00000581180 TPM2P07951 284 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 CA8P35219 290 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 RAP1GAPP47736 663 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 LHX1P48742 406 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 NDUFV1P49821 464 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 LRMPQ12912 555 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 TRIM65Q6PJ69 517 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 SCARA5Q6ZMJ2 495 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 OR10T2Q8NGX3 314 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 NT5C1BQ96P26 610 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 EMILIN2Q9BXX0 1053 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 SIX2Q9NPC8 291 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 RTN4Q9NQC3 1192 aaKnown RBP16.16■□□□□ 0.18
MKS1-210ENST00000581180 CDY1Q9Y6F8 540 aa16.16■□□□□ 0.18
MKS1-210ENST00000581180 REV3LO60673 3130 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 A0A1B0GTH6 734 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 OR6C75A6NL08 312 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 PES1O00541 588 aaKnown RBP16.15■□□□□ 0.18
MKS1-210ENST00000581180 PER2O15055 1255 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 HCRTO43612 131 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 CLSTN1O94985 981 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 WEE2P0C1S8 567 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 FOSL2P15408 326 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 LMO2P25791 158 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 OR1D2P34982 312 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 NRIP1P48552 1158 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 FANCCQ00597 558 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 INCA1Q0VD86 236 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 HYAL1Q12794 435 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 CUL2Q13617 745 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 KCNC3Q14003 757 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 RAB33AQ14088 237 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 PHLDB3Q6NSJ2 640 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 ARHGEF19Q8IW93 802 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 THEM5Q8N1Q8 247 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 UBR7Q8N806 425 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 SLC22A17Q8WUG5 538 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 NAP1L5Q96NT1 182 aaPredicted RBP16.15■□□□□ 0.18
MKS1-210ENST00000581180 TMEM209Q96SK2 561 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 CDCA3Q99618 268 aaPredicted RBP16.15■□□□□ 0.18
MKS1-210ENST00000581180 ARID3AQ99856 593 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 ACBD6Q9BR61 282 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 RBSNQ9H1K0 784 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 TLE6Q9H808 572 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 DDX43Q9NXZ2 648 aaKnown RBP16.15■□□□□ 0.18
MKS1-210ENST00000581180 STXBP5LQ9Y2K9 1186 aa16.15■□□□□ 0.18
MKS1-210ENST00000581180 TEX33O43247 280 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 C1RP00736 705 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 ADH1AP07327 375 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 TBXAS1P24557 533 aaPredicted RBP16.14■□□□□ 0.17
MKS1-210ENST00000581180 KLRC2P26717 231 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.17
MKS1-210ENST00000581180 GNL1P36915 607 aaPredicted RBP16.14■□□□□ 0.17
MKS1-210ENST00000581180 CLCN4P51793 760 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 ROR1Q01973 937 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 APBA1Q02410 837 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 GCNT1Q02742 428 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 COL19A1Q14993 1142 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 NR1I3Q14994 352 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 FKBP15Q5T1M5 1219 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 LILRA6Q6PI73 481 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 RBM23Q86U06 439 aaKnown RBP16.14■□□□□ 0.17
MKS1-210ENST00000581180 GLYCTKQ8IVS8 523 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 OR6B3Q8NGW1 331 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 KAT5Q92993 513 aa16.14■□□□□ 0.17
MKS1-210ENST00000581180 PPP2R3CQ969Q6 453 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms