RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TDGF1P13385 188 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 GABRR2P28476 465 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 SPEM2Q0P670 501 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 RABEP1Q15276 862 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 C9orf57Q5W0N0 161 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 JADE1Q6IE81 842 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 LONP2Q86WA8 852 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 TMC8Q8IU68 726 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 EXOC4Q96A65 974 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 REEP2Q9BRK0 252 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 TASP1Q9H6P5 420 aa19.38■□□□□ 0.69
MKS1-209ENST00000580127 RALGAPA1Q6GYQ0 2036 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 ARNTLO00327 626 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 PAPSS2O95340 614 aaPredicted RBP19.37■□□□□ 0.69
MKS1-209ENST00000580127 SATB1Q01826 763 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 POU5F1Q01860 360 aaKnown RBP19.37■□□□□ 0.69
MKS1-209ENST00000580127 CACNB1Q02641 598 aaPredicted RBP19.37■□□□□ 0.69
MKS1-209ENST00000580127 POSTNQ15063 836 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 LPAL2Q16609 132 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 MGAT5BQ3V5L5 792 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 CEP68Q76N32 757 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.37■□□□□ 0.69
MKS1-209ENST00000580127 DCP1BQ8IZD4 617 aaKnown RBP19.37■□□□□ 0.69
MKS1-209ENST00000580127 NETO1Q8TDF5 533 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 BPIFB1Q8TDL5 484 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 SEPT5Q99719 369 aaPredicted RBP19.37■□□□□ 0.69
MKS1-209ENST00000580127 HAPLN2Q9GZV7 340 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 DNAJC25Q9H1X3 360 aa19.37■□□□□ 0.69
MKS1-209ENST00000580127 CPSF3Q9UKF6 684 aaKnown RBP19.37■□□□□ 0.69
MKS1-209ENST00000580127 PIRO00625 290 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 NRG2O14511 850 aaPredicted RBP19.36■□□□□ 0.69
MKS1-209ENST00000580127 ATG13O75143 517 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 VNN2O95498 520 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 CYP11A1P05108 521 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 HOXA6P31267 233 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 CTHP32929 405 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 LONP1P36776 959 aaKnown RBP19.36■□□□□ 0.69
MKS1-209ENST00000580127 ITPRIPL2Q3MIP1 535 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 SLC39A12Q504Y0 691 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 ADALQ6DHV7 355 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 GAREM2Q75VX8 874 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 GPIHBP1Q8IV16 184 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 KRI1Q8N9T8 703 aaKnown RBP19.36■□□□□ 0.69
MKS1-209ENST00000580127 C2CD2Q9Y426 696 aa19.36■□□□□ 0.69
MKS1-209ENST00000580127 CHURC1-FNTBB4DL54 471 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 CYB561D2O14569 222 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 TGM1P22735 817 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 FNTBP49356 437 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 TAF6P49848 677 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 GUCY2FP51841 1108 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 ZNF131P52739 623 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 GTF2BQ00403 316 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 CSRP2Q16527 193 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 SPPL2BQ8TCT7 592 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 DDX1Q92499 740 aaKnown RBP19.35■□□□□ 0.69
MKS1-209ENST00000580127 KIF2CQ99661 725 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 ZCWPW1Q9H0M4 648 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 CRISPLD1Q9H336 500 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 DPP3Q9NY33 737 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 NCOR2Q9Y618 2525 aa19.35■□□□□ 0.69
MKS1-209ENST00000580127 ANO9A1A5B4 782 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 DCDC2BA2VCK2 349 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 SOBPA7XYQ1 873 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 HRO43593 1189 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 FAM189A1O60320 539 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 DDX6P26196 483 aaKnown RBP eCLIP19.34■□□□□ 0.69
MKS1-209ENST00000580127 GJB2P29033 226 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 AVPR1AP37288 418 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 MCM2P49736 904 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 GRSF1Q12849 480 aaKnown RBP eCLIP19.34■□□□□ 0.69
MKS1-209ENST00000580127 PON2Q15165 354 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 STXBP5Q5T5C0 1151 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 LARP1BQ659C4 914 aaKnown RBP19.34■□□□□ 0.69
MKS1-209ENST00000580127 HEATR6Q6AI08 1181 aaKnown RBP19.34■□□□□ 0.69
MKS1-209ENST00000580127 CC2D1AQ6P1N0 951 aaPredicted RBP19.34■□□□□ 0.69
MKS1-209ENST00000580127 NT5DC4Q86YG4 428 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 RSPRY1Q96DX4 576 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 PYM1Q9BRP8 204 aaKnown RBP19.34■□□□□ 0.69
MKS1-209ENST00000580127 SEMA4GQ9NTN9 838 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 GTSE1Q9NYZ3 720 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 AGO2Q9UKV8 859 aaKnown RBP19.34■□□□□ 0.69
MKS1-209ENST00000580127 SMC3Q9UQE7 1217 aa19.34■□□□□ 0.69
MKS1-209ENST00000580127 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.34■□□□□ 0.69
MKS1-209ENST00000580127 IL18RAPO95256 599 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 DDIT3P35638 169 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 PNPLA4P41247 253 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 SOX9P48436 509 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 ACOT2P49753 483 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 TSPY1Q01534 308 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 MCM6Q14566 821 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 SV2CQ496J9 727 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 TTC8Q8TAM2 541 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 CACTINQ8WUQ7 758 aaKnown RBP19.33■□□□□ 0.68
MKS1-209ENST00000580127 RAD54LQ92698 747 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 UPF2Q9HAU5 1272 aaKnown RBP19.33■□□□□ 0.68
MKS1-209ENST00000580127 PARD6AQ9NPB6 346 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 GKN1Q9NS71 199 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 RBM12Q9NTZ6 932 aaKnown RBP19.33■□□□□ 0.68
MKS1-209ENST00000580127 EXOC7Q9UPT5 735 aa19.33■□□□□ 0.68
MKS1-209ENST00000580127 SPTBN2O15020 2390 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms