RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 FFAR2O15552 330 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 MSCO60682 206 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 CD4P01730 458 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 CYP17A1P05093 508 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 PTMAP06454 111 aaKnown RBP3.6□□□□□ -1.83
KPNB1-208ENST00000580019 MYF5P13349 255 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 XBP1P17861 261 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 HSPA2P54652 639 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 IRF9Q00978 393 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 PRKG1Q13976 671 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 FSCN1Q16658 493 aaKnown RBP3.6□□□□□ -1.83
KPNB1-208ENST00000580019 UGT8Q16880 541 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 TOR2AQ5JU69 321 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 FKBP15Q5T1M5 1219 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 AGAP9Q5VTM2 703 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 TRIM68Q6AZZ1 485 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 FASTKD5Q7L8L6 764 aaKnown RBP3.6□□□□□ -1.83
KPNB1-208ENST00000580019 ZSCAN30Q86W11 494 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 RTKN2Q8IZC4 609 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 PIP4K2CQ8TBX8 421 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 APIPQ96GX9 242 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 RAX2Q96IS3 184 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 CGRRF1Q99675 332 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 TTLL2Q9BWV7 592 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 LSM14BQ9BX40 385 aaKnown RBP3.6□□□□□ -1.83
KPNB1-208ENST00000580019 TMEM120AQ9BXJ8 343 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 KMT5AQ9NQR1 393 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 NKIRAS2Q9NYR9 191 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 USP36Q9P275 1121 aaKnown RBP3.6□□□□□ -1.83
KPNB1-208ENST00000580019 TMX2Q9Y320 296 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 PTPRMP28827 1452 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 ABCC8Q09428 1581 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 GOLGA6L6A8MZA4 724 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 FRS3O43559 492 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 NCK2O43639 380 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 PLOD3O60568 738 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 RBMXL2O75526 392 aaKnown RBP3.59□□□□□ -1.83
KPNB1-208ENST00000580019 FGF18O76093 207 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 GFPT2O94808 682 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 ALDH2P05091 517 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 ZBTB48P10074 688 aaPredicted RBP3.59□□□□□ -1.83
KPNB1-208ENST00000580019 OSMP13725 252 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 GRK3P35626 688 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 RAD52P43351 418 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 MRPS9P82933 396 aaKnown RBP3.59□□□□□ -1.83
KPNB1-208ENST00000580019 SRSF2Q01130 221 aaKnown RBP3.59□□□□□ -1.83
KPNB1-208ENST00000580019 GRM1Q13255 1194 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 CCNG2Q16589 344 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 NBPF8Q3BBV2 869 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 CCDC92Q53HC0 331 aaPredicted RBP3.59□□□□□ -1.83
KPNB1-208ENST00000580019 THEMIS2Q5TEJ8 643 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 APOA5Q6Q788 366 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 DSTYKQ6XUX3 929 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 CXXC5Q7LFL8 322 aaKnown RBP3.59□□□□□ -1.83
KPNB1-208ENST00000580019 RBM12BQ8IXT5 1001 aaKnown RBP3.59□□□□□ -1.83
KPNB1-208ENST00000580019 ESX1Q8N693 406 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 PPM1NQ8N819 430 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 NKAIN3Q8N8D7 197 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 SIMC1Q8NDZ2 872 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 RABGGTAQ92696 567 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 PAWRQ96IZ0 340 aaKnown RBP3.59□□□□□ -1.83
KPNB1-208ENST00000580019 SLC2A13Q96QE2 648 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 COLEC11Q9BWP8 271 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 AP1M1Q9BXS5 423 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 RETREG1Q9H6L5 497 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 ATP6V0A4Q9HBG4 840 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 SLC39A2Q9NP94 309 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 WASH6PQ9NQA3 447 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 ITM2CQ9NQX7 267 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 SH3GLB2Q9NR46 395 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 IRAK4Q9NWZ3 460 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 IFT80Q9P2H3 777 aaPredicted RBP3.59□□□□□ -1.83
KPNB1-208ENST00000580019 CBLCQ9ULV8 474 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 CORO2BQ9UQ03 480 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 PCDHGB2Q9Y5G2 931 aa3.59□□□□□ -1.83
KPNB1-208ENST00000580019 POLA1P09884 1462 aaPredicted RBP3.59□□□□□ -1.84
KPNB1-208ENST00000580019 RAD54L2Q9Y4B4 1467 aa3.59□□□□□ -1.84
KPNB1-208ENST00000580019 DNMBPQ6XZF7 1577 aa3.59□□□□□ -1.84
KPNB1-208ENST00000580019 A0A088AWK7 358 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 POM121BA6NF01 834 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 B4E171 279 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 ZNF561-AS1K7EIQ3 104 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 RPLP2P05387 115 aaKnown RBP3.58□□□□□ -1.84
KPNB1-208ENST00000580019 LCP1P13796 627 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 CCKBRP32239 447 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 HOXD12P35452 270 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 ADCY8P40145 1251 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 TSPAN7P41732 249 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 AVPR1BP47901 424 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 FXR1P51114 621 aaKnown RBP eCLIP3.58□□□□□ -1.84
KPNB1-208ENST00000580019 KIF11P52732 1056 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 BCAR1P56945 870 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 JAM2P57087 298 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 NHLH1Q02575 133 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 ZNF543Q08ER8 600 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 ELAVL1Q15717 326 aaKnown RBP3.58□□□□□ -1.84
KPNB1-208ENST00000580019 GPR19Q15760 415 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.58□□□□□ -1.84
KPNB1-208ENST00000580019 ZACNQ401N2 412 aa3.58□□□□□ -1.84
KPNB1-208ENST00000580019 CCDC157Q569K6 752 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms