RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 MMP21Q8N119 569 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 CCDC97Q96F63 343 aaPredicted RBP6.73□□□□□ -1.33
CCDC178-209ENST00000579947 KDM4CQ9H3R0 1056 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 TASP1Q9H6P5 420 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 BSNQ9UPA5 3926 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 GOLGA4Q13439 2230 aaKnown RBP6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ICE1Q9Y2F5 2266 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 LRBAP50851 2863 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 TCRBV21S2A2A0A5A6 115 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ZNF217O75362 1048 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 OATP04181 439 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 KIF5BP33176 963 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 SEC13P55735 322 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 SLFN5Q08AF3 891 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 SRGAP1Q7Z6B7 1085 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 VCPIP1Q96JH7 1222 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ZKSCAN3Q9BRR0 538 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 KIF9Q9HAQ2 790 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 NRBP2Q9NSY0 501 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 CUEDC1Q9NWM3 386 aaPredicted RBP6.73□□□□□ -1.33
CCDC178-209ENST00000579947 GEMIN8Q9NWZ8 242 aaKnown RBP6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ANAPC2Q9UJX6 822 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 CLCA2Q9UQC9 943 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ABCA2Q9BZC7 2435 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 TARBP2Q15633 366 aaKnown RBP6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ATCAYQ86WG3 371 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 PGBD3Q8N328 593 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ESR2Q92731 530 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 MMS19Q96T76 1030 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 EIF2AQ9BY44 585 aaKnown RBP6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ECT2Q9H8V3 914 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 IFT122Q9HBG6 1241 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ASCL3Q9NQ33 180 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 CACNG4Q9UBN1 327 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 AFF4Q9UHB7 1163 aaKnown RBP6.73□□□□□ -1.33
CCDC178-209ENST00000579947 ZMYM5Q9UJ78 669 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 F8P00451 2351 aa6.73□□□□□ -1.33
CCDC178-209ENST00000579947 TMEM131Q92545 1883 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 SGK1O00141 431 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 IPO8O15397 1037 aaKnown RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 RAB11FIP3O75154 756 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 KLF8O95600 359 aaPredicted RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 DDAH2O95865 285 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 PRKCBP05771 671 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 PSAPP07602 524 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 SMARCA1P28370 1054 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 AXLP30530 894 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 DNM2P50570 870 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 CCT8P50990 548 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 FHL5Q5TD97 284 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 EXTL1Q92935 676 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 ZFRQ96KR1 1074 aaKnown RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 MTMR9Q96QG7 549 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 ADNPQ9H2P0 1102 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 ZFHX3Q15911 3703 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 E2F8A0AVK6 867 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 BHMG1C9JSJ3 638 aaPredicted RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 DHX15O43143 795 aaKnown RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 LDOC1O95751 146 aaPredicted RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 TKTP29401 623 aaKnown RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 LSSP48449 732 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 CYP4A11Q02928 519 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 SGO2Q562F6 1265 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 MFSD6Q6ZSS7 791 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 KANSL1Q7Z3B3 1105 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 SMAP1Q8IYB5 467 aaPredicted RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 ZCCHC9Q8N567 271 aaKnown RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 ALLCQ8N6M5 410 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 IL17RCQ8NAC3 791 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 TXNDC5Q8NBS9 432 aaKnown RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 THSD1Q9NS62 852 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 SUCLA2Q9P2R7 463 aaPredicted RBP6.72□□□□□ -1.33
CCDC178-209ENST00000579947 TNNQ9UQP3 1299 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 LRRK1Q38SD2 2015 aa6.72□□□□□ -1.33
CCDC178-209ENST00000579947 A0A087X0B3 334 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 CASTOR2A6NHX0 329 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 DDX39AO00148 427 aaKnown RBP6.71□□□□□ -1.33
CCDC178-209ENST00000579947 C8BP07358 591 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 GABRG2P18507 467 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 DCAF6Q58WW2 860 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 GAREM2Q75VX8 874 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 NIPA1Q7RTP0 329 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 IQCA1Q86XH1 822 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 TMEM57Q8N5G2 664 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 ENAHQ8N8S7 591 aaPredicted RBP6.71□□□□□ -1.33
CCDC178-209ENST00000579947 CEP89Q96ST8 783 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 ZSCAN10Q96SZ4 725 aaPredicted RBP6.71□□□□□ -1.33
CCDC178-209ENST00000579947 CALCOCO1Q9P1Z2 691 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 GABBR1Q9UBS5 961 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 YIPF1Q9Y548 306 aa6.71□□□□□ -1.33
CCDC178-209ENST00000579947 H7C4K7 107 aa6.71□□□□□ -1.34
CCDC178-209ENST00000579947 NDUFS2O75306 463 aa6.71□□□□□ -1.34
CCDC178-209ENST00000579947 COL8A1P27658 744 aa6.71□□□□□ -1.34
CCDC178-209ENST00000579947 GABREP78334 506 aa6.71□□□□□ -1.34
CCDC178-209ENST00000579947 DDX10Q13206 875 aaKnown RBP6.71□□□□□ -1.34
CCDC178-209ENST00000579947 PCBP1Q15365 356 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCDC178-209ENST00000579947 RHPN2Q8IUC4 686 aa6.71□□□□□ -1.34
CCDC178-209ENST00000579947 SLC34A3Q8N130 599 aa6.71□□□□□ -1.34
CCDC178-209ENST00000579947 CNDP2Q96KP4 475 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms