RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 C19orf57Q0VDD7 668 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 FBXO43Q4G163 708 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 BLOC1S2Q6QNY1 142 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PIK3AP1Q6ZUJ8 805 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 RAB44Q7Z6P3 723 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 SLFN12Q8IYM2 578 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TMEFF1Q8IYR6 380 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TMEM130Q8N3G9 435 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TTC9BQ8N6N2 239 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ATAD1Q8NBU5 361 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 RLN3Q8WXF3 142 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ACDQ96AP0 544 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TOPORSQ9NS56 1045 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PCDHB8Q9UN66 801 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CCL26Q9Y258 94 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ATXN2Q99700 1313 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 NID2Q14112 1375 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 FGF19O95750 216 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PDIA3P30101 505 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 RPL9P32969 192 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ZNF423Q2M1K9 1284 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CENPPQ6IPU0 288 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ALKAL1Q6UXT8 129 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 LPCAT2Q7L5N7 544 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 MCPH1Q8NEM0 835 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 BEST2Q8NFU1 509 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 EZH1Q92800 747 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PSMG2Q969U7 264 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 GCNAQ96QF7 691 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 LPIN3Q9BQK8 851 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PCDHA12Q9UN75 941 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ASB3Q9Y575 518 aa14.4□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ATG2BQ96BY7 2078 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 DEXIO95424 95 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 HARSP12081 509 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 GJA4P35212 333 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 GRM5P41594 1212 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 PTGER3P43115 390 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 NAMPTP43490 491 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SEC13P55735 322 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 BFSP1Q12934 665 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TAF12Q16514 161 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 C2orf27AQ580R0 203 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 XKR4Q5GH76 650 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 GALNT17Q6IS24 598 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CC2D1AQ6P1N0 951 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 APBB1IPQ7Z5R6 666 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 USP37Q86T82 979 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ITIH5Q86UX2 942 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SYT12Q8IV01 421 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CMTM8Q8IZV2 173 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 FRMD1Q8N878 549 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 OR2I1PQ8NGU4 316 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 KCNB2Q92953 911 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CRELD1Q96HD1 420 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CAMK1GQ96NX5 476 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SNX14Q9Y5W7 946 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 EML5Q05BV3 1969 aa14.39□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ABCA7Q8IZY2 2146 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ANTXRLA6NF34 631 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 HSPA4P34932 840 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 AVPR1AP37288 418 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TXKP42681 527 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 GPR17Q13304 367 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ZNF568Q3ZCX4 644 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CCDC33Q8N5R6 958 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 MAB21L3Q8N8X9 362 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 OXER1Q8TDS5 423 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 GIPC2Q8TF65 315 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 USP13Q92995 863 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CD101Q93033 1021 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 EXOC4Q96A65 974 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ACAP3Q96P50 834 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 NACC1Q96RE7 527 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SEPT5Q99719 369 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 NAP1L4Q99733 375 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CDT1Q9H211 546 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
CDK5RAP3-213ENST00000579605 MTMR11A4FU01 709 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 UPK3BL1B0FP48 263 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 UPK3BL2E5RIL1 263 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TNFRSF10BO14763 440 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CPLX1O14810 134 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 OPHN1O60890 802 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 OAZ2O95190 189 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 XRCC6P12956 609 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 KCNE1P15382 129 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 RPS6KB1P23443 525 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 WEE1P30291 646 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CDC25CP30307 473 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TRIP6Q15654 476 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 EARS2Q5JPH6 523 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SLC23A3Q6PIS1 610 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 DSTYKQ6XUX3 929 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CCNI2Q6ZMN8 369 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 DEFB119Q8N690 84 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 MDGA1Q8NFP4 955 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 RIN3Q8TB24 985 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 LARP6Q9BRS8 491 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TCHPQ9BT92 498 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms