RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 MIIPQ5JXC2 388 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 GBP6Q6ZN66 633 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 GLYCTKQ8IVS8 523 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 ADGRF2Q8IZF7 708 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 ELMO3Q96BJ8 720 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 HSD3B7Q9H2F3 369 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 CYP3A43Q9HB55 503 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 APOBEC3GQ9HC16 384 aaKnown RBP16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 DDX43Q9NXZ2 648 aaKnown RBP16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 TAB2Q9NYJ8 693 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 FBXL5Q9UKA1 691 aa16.67■□□□□ 0.26
SLC6A4-205ENST00000579221 GABRDO14764 452 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 LRRN2O75325 713 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 COPB1P53618 953 aaKnown RBP16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 ARPP19P56211 112 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 HYAL1Q12794 435 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 RAB33AQ14088 237 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 CCDC85BQ15834 202 aaPredicted RBP16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 EXOC3L4Q17RC7 722 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 FKBP15Q5T1M5 1219 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 SLC8B1Q6J4K2 584 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 PALB2Q86YC2 1186 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 OR6B3Q8NGW1 331 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 LMO3Q8TAP4 145 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 TATDN2Q93075 761 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 NT5C1BQ96P26 610 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 ACBD6Q9BR61 282 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 NIF3L1Q9GZT8 377 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 INTS2Q9H0H0 1204 aaKnown RBP16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 STXBP5LQ9Y2K9 1186 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 CDY1Q9Y6F8 540 aa16.66■□□□□ 0.26
SLC6A4-205ENST00000579221 PCSK1P29120 753 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 CDH8P55286 799 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 LRMPQ12912 555 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 FILIP1LQ4L180 1135 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 RSPO2Q6UXX9 243 aaPredicted RBP16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 SCARA5Q6ZMJ2 495 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 EFHBQ8N7U6 833 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 SLC22A17Q8WUG5 538 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 PPM1EQ8WY54 764 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 MRPL45Q9BRJ2 306 aaKnown RBP16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 CRACR2AQ9BSW2 395 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 BCO2Q9BYV7 579 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 DNAI2Q9GZS0 605 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 GCNT4Q9P109 453 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 DPP7Q9UHL4 492 aa16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 COL4A4P53420 1690 aaPredicted RBP16.65■□□□□ 0.26
SLC6A4-205ENST00000579221 A8MXQ7 604 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 ADAM12O43184 909 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 GLUD1P00367 558 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 PDGFRBP09619 1106 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 WEE2P0C1S8 567 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 SRGAP2BP0DMP2 458 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 ATP1A3P13637 1013 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 TBXAS1P24557 533 aaPredicted RBP16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 GTF2F1P35269 517 aaKnown RBP eCLIP16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 ASPAP45381 313 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 CLCN4P51793 760 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 TSPY1Q01534 308 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 SMARCB1Q12824 385 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 ADAM15Q13444 863 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 SKIV2LQ15477 1246 aaKnown RBP16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 LILRA6Q6PI73 481 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 ELMSAN1Q6PJG2 1045 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 OSTM1Q86WC4 334 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 TTC39CQ8N584 583 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 ZNF461Q8TAF7 563 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 KBTBD7Q8WVZ9 684 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 FAM81BQ96LP2 452 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 RTP3Q9BQQ7 232 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 ZCWPW1Q9H0M4 648 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 FAM124BQ9H5Z6 455 aaPredicted RBP16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 SMYD3Q9H7B4 428 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 CDH9Q9ULB4 789 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 LAMA3Q16787 3333 aa16.64■□□□□ 0.25
SLC6A4-205ENST00000579221 SCN1AP35498 2009 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 LAMA2P24043 3122 aaKnown RBP16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 TGM5O43548 720 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 SERPINC1P01008 464 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 CPB1P15086 417 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 SLC9A1P19634 815 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 LMO2P25791 158 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 PON1P27169 355 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 ELF1P32519 619 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 RAP1GAPP47736 663 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 ROR1Q01973 937 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 CUL2Q13617 745 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 TPGS2Q68CL5 300 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 LLGL2Q6P1M3 1020 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 UNC93AQ86WB7 457 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 PPM1KQ8N3J5 372 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 OR10T2Q8NGX3 314 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 HDAC7Q8WUI4 952 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 CASP10Q92851 521 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 SDCBP2Q9H190 292 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 MAFFQ9ULX9 164 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 HCFC2Q9Y5Z7 792 aa16.63■□□□□ 0.25
SLC6A4-205ENST00000579221 CHD9Q3L8U1 2897 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms