RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 C10orf76Q5T2E6 689 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 SPOPLQ6IQ16 392 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 WDR59Q6PJI9 974 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 DPH6Q7L8W6 267 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 IRF2BP2Q7Z5L9 587 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 ZNF677Q86XU0 584 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 TMEM139Q8IV31 216 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 TMEM130Q8N3G9 435 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 RABGGTAQ92696 567 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 KREMEN1Q96MU8 473 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 MMS19Q96T76 1030 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 PAAF1Q9BRP4 392 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 C17orf80Q9BSJ5 609 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 FAN1Q9Y2M0 1017 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 EPN1Q9Y6I3 576 aaPredicted RBP14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 NLRC5Q86WI3 1866 aa14.88□□□□□ -0.03
CSNK1D-209ENST00000578904 KPNA7A9QM74 516 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 NT5C1B-RDH14C9J2C7 533 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 SOX1O00570 391 aaPredicted RBP14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 HUS1O60921 280 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 KIF4AO95239 1232 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 NDUFA10O95299 355 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 TNFAIP3P21580 790 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 BMPR1AP36894 532 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 BMS1Q14692 1282 aaKnown RBP14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 PPP1R2P3Q6NXS1 205 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 SPRED2Q7Z698 418 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 SLC39A11Q8N1S5 342 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 HASPINQ8TF76 798 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 CHP1Q99653 195 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 COLEC11Q9BWP8 271 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 BCO2Q9BYV7 579 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 HAUS4Q9H6D7 363 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 CERS4Q9HA82 394 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 APOBEC3GQ9HC16 384 aaKnown RBP14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 GDAP2Q9NXN4 497 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 A0A0C4DFX4 3053 aa14.87□□□□□ -0.03
CSNK1D-209ENST00000578904 SOWAHDA6NJG2 315 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 EIF3CLB5ME19 914 aaKnown RBP14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 F8W810 466 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 MED7O43513 233 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 B3GAT3O94766 335 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 EIF4A3P38919 411 aaKnown RBP14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 ERVK-21P61565 698 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 UPP1Q16831 310 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 DCLRE1AQ6PJP8 1040 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 TMEM270Q6UE05 265 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 TMEM173Q86WV6 379 aaPredicted RBP14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 APPL2Q8NEU8 664 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 FBXO22Q8NEZ5 403 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 CXorf38Q8TB03 319 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 ARNTL2Q8WYA1 636 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 TMEM169Q96HH4 297 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 LRCH3Q96II8 777 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 EIF3CQ99613 913 aaKnown RBP14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 PLVAPQ9BX97 442 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 GPR88Q9GZN0 384 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 PDCL3Q9H2J4 239 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 CISHQ9NSE2 258 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 MARCH5Q9NX47 278 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 SPG21Q9NZD8 308 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 ARHGAP20Q9P2F6 1191 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 KIAA1257Q9ULG3 409 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 CNTN6Q9UQ52 1028 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 SNX9Q9Y5X1 595 aa14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 LAMA2P24043 3122 aaKnown RBP14.86□□□□□ -0.03
CSNK1D-209ENST00000578904 TMEM265A0A087WTH1 108 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 ESPNB1AK53 854 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 C5orf67F2Z3F1 127 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 TMEM189-UBE2V1I3L0A0 370 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 PPEF2O14830 753 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 CYP26A1O43174 497 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 TRAPPC3O43617 180 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 TADA2AO75478 443 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 FGF18O76093 207 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 RB1P06400 928 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 PAEPP09466 180 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 ASPAP45381 313 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 KIF11P52732 1056 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 LILRA4P59901 499 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 SLC18A3Q16572 532 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 HGSNATQ68CP4 663 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 DSTYKQ6XUX3 929 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 SCARA5Q6ZMJ2 495 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 TRIM72Q6ZMU5 477 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 KIAA1328Q86T90 577 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 UNC93AQ86WB7 457 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 TMEM86AQ8N2M4 240 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 TOP6BLQ8N6T0 577 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 KLHL23Q8NBE8 558 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 RBBP8NLQ8NC74 664 aaPredicted RBP14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 C3orf58Q8NDZ4 430 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 SPATA18Q8TC71 538 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 KIAA1524Q8TCG1 905 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 BCL7CQ8WUZ0 217 aaPredicted RBP14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 KAT5Q92993 513 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 IGSF21Q96ID5 467 aa14.85□□□□□ -0.03
CSNK1D-209ENST00000578904 C11orf84Q9BUA3 381 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms