RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 CRIP3Q6Q6R5 217 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 APOA5Q6Q788 366 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 ZNF783Q6ZMS7 281 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 ARHGEF19Q8IW93 802 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 CCAR1Q8IX12 1150 aaKnown RBP2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 Q8NA96 180 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 PCSK9Q8NBP7 692 aaKnown RBP2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 PSD4Q8NDX1 1056 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 OR6B3Q8NGW1 331 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 POC1BQ8TC44 478 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 PROKR1Q8TCW9 393 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 FUBP1Q96AE4 644 aaKnown RBP2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 APIPQ96GX9 242 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 MOGAT1Q96PD6 335 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 P2RX7Q99572 595 aaKnown RBP2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 SARGQ9BW04 601 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 TRIM54Q9BYV2 358 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 LRRC27Q9C0I9 530 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 NUP62CLQ9H1M0 184 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 BHMT2Q9H2M3 363 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 ETAA1Q9NY74 926 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 CTTNBP2NLQ9P2B4 639 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 AGAP1Q9UPQ3 857 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 PAXBP1Q9Y5B6 917 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 HS3ST4Q9Y661 456 aa2.77□□□□□ -1.97
PTP4A1-204ENST00000578299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.77□□□□□ -1.973e-9■□□□□ 10
PTP4A1-204ENST00000578299 SPATA31A3Q5VYP0 1347 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 PRAMEF33A0A0G2JMD5 474 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 CENPVL1A0A0U1RR11 272 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 M0QYG6 137 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 MYO1CO00159 1063 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 BTN3A1O00481 513 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 TOR1BO14657 336 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 TBX3O15119 743 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 TBC1D4O60343 1298 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 PRAMEF10O60809 474 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 DNAJB5O75953 348 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 SUN1O94901 812 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 KIF20AO95235 890 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 SPDEFO95238 335 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 MYL1P05976 194 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 GRPP07492 148 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 ADH4P08319 380 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 BRAFP15056 766 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 PHKG2P15735 406 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 RPL17P18621 184 aaKnown RBP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 FDXRP22570 491 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 MCM7P33993 719 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 VAV2P52735 878 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 BLOC1S1P78537 153 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 FPGSQ05932 587 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 ABHD18Q0P651 414 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 TP53BP2Q13625 1128 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 DYRK1AQ13627 763 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 HLXQ14774 488 aaPredicted RBP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 PTPAQ15257 358 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 SAFBQ15424 915 aaKnown RBP eCLIP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 CNGA2Q16280 664 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 GEN1Q17RS7 908 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 SLC44A4Q53GD3 710 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 COBLL1Q53SF7 1204 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 ABHD17BQ5VST6 288 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 LMBRD2Q68DH5 695 aaPredicted RBP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 TAF2Q6P1X5 1199 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 KSR2Q6VAB6 950 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 MICALCLQ6ZW33 695 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 COL23A1Q86Y22 540 aaPredicted RBP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 FAM9AQ8IZU1 332 aaPredicted RBP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 KRT78Q8N1N4 520 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 NSUN7Q8NE18 718 aaKnown RBP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 FAM46DQ8NEK8 389 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 NACC2Q96BF6 587 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 ADAM2Q99965 735 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 HEPHQ9BQS7 1158 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 SPATA5L1Q9BVQ7 753 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 DPH1Q9BZG8 443 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 BTBD1Q9H0C5 482 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 MMRN2Q9H8L6 949 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 UNKLQ9H9P5 680 aaKnown RBP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 KIAA1586Q9HCI6 787 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 INTS13Q9NVM9 706 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 VSX1Q9NZR4 365 aaPredicted RBP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 ANKFY1Q9P2R3 1169 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 HESX1Q9UBX0 185 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 SRRDQ9UH36 339 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 AFF4Q9UHB7 1163 aaKnown RBP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 OGDHLQ9ULD0 1010 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 TMX2Q9Y320 296 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 RAD54BQ9Y620 910 aa2.76□□□□□ -1.97
PTP4A1-204ENST00000578299 USP19O94966 1318 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 TRGV11A0A075B6L2 103 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 A0A087WWL8 130 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 ANO9A1A5B4 782 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 PIPSLA2A3N6 862 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 TRIM43BA6NCK2 446 aa2.75□□□□□ -1.97
PTP4A1-204ENST00000578299 UNC119BA6NIH7 251 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms