RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 COLEC11Q9BWP8 271 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 TRIM54Q9BYV2 358 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 DPH1Q9BZG8 443 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 TMPRSS5Q9H3S3 457 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 AKIP1Q9NQ31 210 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 STARD7Q9NQZ5 370 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 TBCCD1Q9NVR7 557 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 DDX20Q9UHI6 824 aaKnown RBP3.1□□□□□ -1.91
COPS3-213ENST00000577210 FZD1Q9UP38 647 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 MYRFQ9Y2G1 1151 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 CHST2Q9Y4C5 530 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 SNX13Q9Y5W8 968 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 RAD54BQ9Y620 910 aa3.1□□□□□ -1.91
COPS3-213ENST00000577210 PRAMEF33A0A0G2JMD5 474 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 TRIM43BA6NCK2 446 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 TOR1BO14657 336 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 PMM2O15305 246 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 CCP110O43303 1012 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 THAP12O43422 761 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 PRAMEF10O60809 474 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 PEX14O75381 377 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 CDKL5O76039 1030 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 IL18RAPO95256 599 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 ABHD16AO95870 558 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 AHSGP02765 367 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 GRPP07492 148 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 SBK3P0C264 359 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 KITP10721 976 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 IDEP14735 1019 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 ZKSCAN1P17029 563 aaPredicted RBP3.09□□□□□ -1.91
COPS3-213ENST00000577210 MAKP20794 623 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 FGFR4P22455 802 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 DDX6P26196 483 aaKnown RBP eCLIP3.09□□□□□ -1.91
COPS3-213ENST00000577210 AVPR1BP47901 424 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 SUMO3P55854 103 aaPredicted RBP3.09□□□□□ -1.91
COPS3-213ENST00000577210 LOXL3P58215 753 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 GUCY1B3Q02153 619 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 FPGSQ05932 587 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 EXOSC9Q06265 439 aaKnown RBP3.09□□□□□ -1.91
COPS3-213ENST00000577210 TUBA3CQ13748 450 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 LY6G5CQ5SRR4 150 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 ABHD17BQ5VST6 288 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 TAPT1Q6NXT6 567 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 TUBA3EQ6PEY2 450 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 APOA5Q6Q788 366 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 MICALCLQ6ZW33 695 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 USP51Q70EK9 711 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 PPP1R32Q7Z5V6 425 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 PALM2Q8IXS6 379 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 TMEM132CQ8N3T6 1108 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 PDPRQ8NCN5 879 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 PLBD2Q8NHP8 589 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 POC1BQ8TC44 478 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 BRI3BPQ8WY22 251 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 SNX19Q92543 992 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 SLC9A6Q92581 669 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 FUBP1Q96AE4 644 aaKnown RBP3.09□□□□□ -1.91
COPS3-213ENST00000577210 TRIM43Q96BQ3 446 aaPredicted RBP3.09□□□□□ -1.91
COPS3-213ENST00000577210 MARS2Q96GW9 593 aaKnown RBP3.09□□□□□ -1.91
COPS3-213ENST00000577210 ZNF668Q96K58 619 aaPredicted RBP3.09□□□□□ -1.91
COPS3-213ENST00000577210 KLHL32Q96NJ5 620 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 PLEKHG4BQ96PX9 1271 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 PPP1R9BQ96SB3 815 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 OSBPL9Q96SU4 736 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 ELAC2Q9BQ52 826 aaKnown RBP3.09□□□□□ -1.91
COPS3-213ENST00000577210 SPATA5L1Q9BVQ7 753 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 C1orf43Q9BWL3 253 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 BRIP1Q9BX63 1249 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 BHMT2Q9H2M3 363 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 DHX36Q9H2U1 1008 aaKnown RBP3.09□□□□□ -1.91
COPS3-213ENST00000577210 FAM83DQ9H4H8 585 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 NLRC4Q9NPP4 1024 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 INTS13Q9NVM9 706 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 CDYLQ9Y232 598 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 COMMD10Q9Y6G5 202 aa3.09□□□□□ -1.91
COPS3-213ENST00000577210 TRGV11A0A075B6L2 103 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 A0A087WWL8 130 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 GRXCR1A8MXD5 290 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 M0QYG6 137 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 LEFTY2O00292 366 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 MATN3O15232 486 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 UNC5CO95185 931 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 FCER1AP12319 257 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 NPR1P16066 1061 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 HDCP19113 662 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 TNFRSF1AP19438 455 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 SLC6A2P23975 617 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 PPIFP30405 207 aaKnown RBP3.08□□□□□ -1.92
COPS3-213ENST00000577210 SLC6A4P31645 630 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 MCM7P33993 719 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 PXNP49023 591 aaPredicted RBP3.08□□□□□ -1.92
COPS3-213ENST00000577210 SLC11A2P49281 568 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 CXADRP78310 365 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 FMO1Q01740 532 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 OCA2Q04671 838 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 BIRC2Q13490 618 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 DYRK1AQ13627 763 aa3.08□□□□□ -1.92
COPS3-213ENST00000577210 DAG1Q14118 895 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms