RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 H2AFVQ71UI9 128 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 OTOP2Q7RTS6 562 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 GLYCTKQ8IVS8 523 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 TRIM58Q8NG06 486 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 LNX1Q8TBB1 728 aaPredicted RBP13.27□□□□□ -0.29
TSEN54-204ENST00000577197 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 ZFP42Q96MM3 310 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 GDF15Q99988 308 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 NT5C1AQ9BXI3 368 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 KLK14Q9P0G3 267 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 NXF1Q9UBU9 619 aaKnown RBP13.27□□□□□ -0.29
TSEN54-204ENST00000577197 LCMT1Q9UIC8 334 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 PCDHB7Q9Y5E2 793 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 NCANO14594 1321 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 PODXLO00592 558 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 HUS1O60921 280 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 CYP11A1P05108 521 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 PNMA6AP0CW24 399 aaPredicted RBP13.26□□□□□ -0.29
TSEN54-204ENST00000577197 VDRP11473 427 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 UNGP13051 313 aaPredicted RBP13.26□□□□□ -0.29
TSEN54-204ENST00000577197 CHRNB2P17787 502 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 RAD23BP54727 409 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
TSEN54-204ENST00000577197 CYP27A1Q02318 531 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 TUBB2AQ13885 445 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 CLEC16AQ2KHT3 1053 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 RHOT2Q8IXI1 618 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 CRYBG2Q8N1P7 616 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 APPL2Q8NEU8 664 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 TET1Q8NFU7 2136 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 PHOSPHO2Q8TCD6 241 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 ZNF606Q8WXB4 792 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 TMEM176AQ96HP8 235 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 TNIP3Q96KP6 325 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 TUBB2BQ9BVA1 445 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 MIS12Q9H081 205 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 TRMT1Q9NXH9 659 aaKnown RBP13.26□□□□□ -0.29
TSEN54-204ENST00000577197 LRFN2Q9ULH4 789 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 CEP83Q9Y592 693 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 SNX9Q9Y5X1 595 aa13.26□□□□□ -0.29
TSEN54-204ENST00000577197 MEIS3P2A8K0S8 358 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 ZBBXA8MT70 800 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 M0QZQ0 153 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 GABRDO14764 452 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 MTA2O94776 668 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 CLSTN1O94985 981 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 KIF4AO95239 1232 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 WEE2P0C1S8 567 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 SETSIPP0DME0 302 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 TYMPP19971 482 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 BMP8BP34820 402 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 LHX1P48742 406 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 GUCY2FP51841 1108 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 GSCP56915 257 aaPredicted RBP13.25□□□□□ -0.29
TSEN54-204ENST00000577197 CNGA2Q16280 664 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 SOWAHAQ2M3V2 549 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 CLLU1OSQ5K130 101 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 RASIP1Q5U651 963 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 ARHGAP17Q68EM7 881 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.25□□□□□ -0.29
TSEN54-204ENST00000577197 PHF13Q86YI8 300 aaPredicted RBP13.25□□□□□ -0.29
TSEN54-204ENST00000577197 SLC4A11Q8NBS3 891 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 MSANTD4Q8NCY6 345 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 WHAMMQ8TF30 809 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 CTNNBL1Q8WYA6 563 aaPredicted RBP13.25□□□□□ -0.29
TSEN54-204ENST00000577197 RFFLQ8WZ73 363 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 LPPQ93052 612 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 SECISBP2LQ93073 1101 aaKnown RBP13.25□□□□□ -0.29
TSEN54-204ENST00000577197 TOP1MTQ969P6 601 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 ALS2CR12Q96Q35 445 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 SLC9A7Q96T83 725 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 UBE2OQ9C0C9 1292 aaKnown RBP13.25□□□□□ -0.29
TSEN54-204ENST00000577197 CXCL16Q9H2A7 254 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 SMYD3Q9H7B4 428 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 AVENQ9NQS1 362 aaPredicted RBP13.25□□□□□ -0.29
TSEN54-204ENST00000577197 RNF19AQ9NV58 838 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 GTF3C4Q9UKN8 822 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 POLIQ9UNA4 740 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 PAXBP1Q9Y5B6 917 aa13.25□□□□□ -0.29
TSEN54-204ENST00000577197 TULP1O00294 542 aaPredicted RBP13.24□□□□□ -0.29
TSEN54-204ENST00000577197 MMEP08473 750 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 TNNT1P13805 278 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 NOMO3P69849 1222 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
TSEN54-204ENST00000577197 SGO2Q562F6 1265 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 ACAD10Q6JQN1 1059 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.24□□□□□ -0.29
TSEN54-204ENST00000577197 COLGALT2Q8IYK4 626 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 ABI1Q8IZP0 508 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 C17orf53Q8N3J3 647 aaPredicted RBP13.24□□□□□ -0.29
TSEN54-204ENST00000577197 TMEM35BQ8NCS4 154 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 KIF18AQ8NI77 898 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 SLC20A1Q8WUM9 679 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 SUSD3Q96L08 255 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 C16orf45Q96MC5 204 aaPredicted RBP13.24□□□□□ -0.29
TSEN54-204ENST00000577197 NOX5Q96PH1 765 aa13.24□□□□□ -0.29
TSEN54-204ENST00000577197 OXCT2Q9BYC2 517 aaPredicted RBP13.24□□□□□ -0.29
TSEN54-204ENST00000577197 LACRTQ9GZZ8 138 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms