RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 WDFY4Q6ZS81 3184 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 A0A1B0GVL5 298 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 GALR2O43603 387 aaPredicted RBP16.7■□□□□ 0.26
SF3B3-215ENST00000577085 ECI2O75521 394 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 PFKFB1P16118 471 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 AOC1P19801 751 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 CMA1P23946 247 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 CYP2J2P51589 502 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 WNT7BP56706 349 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 GPC5P78333 572 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 SNRNP35Q16560 246 aaKnown RBP16.7■□□□□ 0.26
SF3B3-215ENST00000577085 DUOXA2Q1HG44 320 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 PRSS36Q5K4E3 855 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 EPM2AIP1Q7L775 607 aaPredicted RBP16.7■□□□□ 0.26
SF3B3-215ENST00000577085 CBWD2Q8IUF1 395 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 GRAMD1CQ8IYS0 662 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 HS6ST3Q8IZP7 471 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 OR10T2Q8NGX3 314 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 C2orf15Q8WU43 125 aaKnown RBP16.7■□□□□ 0.26
SF3B3-215ENST00000577085 ATOH1Q92858 354 aaPredicted RBP16.7■□□□□ 0.26
SF3B3-215ENST00000577085 TCEAL4Q96EI5 215 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 TMEM209Q96SK2 561 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 ZCWPW1Q9H0M4 648 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 ZFP14Q9HCL3 533 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 AGPAT3Q9NRZ7 376 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 HSFX1Q9UBD0 423 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 USP25Q9UHP3 1055 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 ASB3Q9Y575 518 aa16.7■□□□□ 0.26
SF3B3-215ENST00000577085 ANK1P16157 1881 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 KMT2EQ8IZD2 1858 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 CLIC2O15247 247 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 FGF19O95750 216 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 DLATP10515 647 aaKnown RBP16.69■□□□□ 0.26
SF3B3-215ENST00000577085 TNNI1P19237 187 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 MYL7Q01449 175 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 LMBRD2Q68DH5 695 aaPredicted RBP16.69■□□□□ 0.26
SF3B3-215ENST00000577085 CWF19L1Q69YN2 538 aaKnown RBP16.69■□□□□ 0.26
SF3B3-215ENST00000577085 TMEM86AQ8N2M4 240 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 XXYLT1Q8NBI6 393 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 GOLGA5Q8TBA6 731 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 CCDC47Q96A33 483 aaKnown RBP16.69■□□□□ 0.26
SF3B3-215ENST00000577085 PAGE5Q96GU1 130 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 GPR88Q9GZN0 384 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 TBC1D17Q9HA65 648 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 ABI2Q9NYB9 513 aaPredicted RBP16.69■□□□□ 0.26
SF3B3-215ENST00000577085 CGNQ9P2M7 1197 aaKnown RBP16.69■□□□□ 0.26
SF3B3-215ENST00000577085 SNX9Q9Y5X1 595 aa16.69■□□□□ 0.26
SF3B3-215ENST00000577085 KRBA1A5PL33 1030 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 H0Y858 1186 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 PRPF40AO75400 957 aaKnown RBP16.68■□□□□ 0.26
SF3B3-215ENST00000577085 CLSTN1O94985 981 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 MYL1P05976 194 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 NPR3P17342 541 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 HOXD13P35453 343 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 CCR2P41597 374 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 SYKP43405 635 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 CDR1P51861 262 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 TCF15Q12870 199 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
SF3B3-215ENST00000577085 WDR49Q8IV35 697 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 PDCL2Q8N4E4 241 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 SPPL2BQ8TCT7 592 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 ELSPBP1Q96BH3 223 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 CCDC127Q96BQ5 260 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 GCNAQ96QF7 691 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 CRISPLD1Q9H336 500 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 DDX43Q9NXZ2 648 aaKnown RBP16.68■□□□□ 0.26
SF3B3-215ENST00000577085 PCDHB5Q9Y5E4 795 aa16.68■□□□□ 0.26
SF3B3-215ENST00000577085 DOCK8Q8NF50 2099 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 A0A1W2PRU2 124 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 TGFB1I1O43294 461 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 PI15O43692 258 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 ACTN4O43707 911 aaKnown RBP16.67■□□□□ 0.26
SF3B3-215ENST00000577085 EXOC3O60645 756 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 SOAT2O75908 522 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 VNN2O95498 520 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 GJA1P17302 382 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 EPHA5P54756 1037 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 PSMD2Q13200 908 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 SNW1Q13573 536 aaKnown RBP16.67■□□□□ 0.26
SF3B3-215ENST00000577085 TEAD2Q15562 447 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 NFE2Q16621 373 aaPredicted RBP16.67■□□□□ 0.26
SF3B3-215ENST00000577085 ARHGAP15Q53QZ3 475 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 FAM78AQ5JUQ0 283 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 TANGO2Q6ICL3 276 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 PHLDB3Q6NSJ2 640 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 DNAJB7Q7Z6W7 309 aaPredicted RBP16.67■□□□□ 0.26
SF3B3-215ENST00000577085 ALYREFQ86V81 257 aaKnown RBP16.67■□□□□ 0.26
SF3B3-215ENST00000577085 ADGRF2Q8IZF7 708 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 TTC9BQ8N6N2 239 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 ZSCAN18Q8TBC5 510 aaPredicted RBP16.67■□□□□ 0.26
SF3B3-215ENST00000577085 SMARCD2Q92925 531 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 PSMG2Q969U7 264 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 BORCS6Q96GS4 357 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 CCDC34Q96HJ3 373 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 HPDLQ96IR7 371 aa16.67■□□□□ 0.26
SF3B3-215ENST00000577085 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms