RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PHACTR2O75167 634 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 ATP2C2O75185 946 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 KIF20AO95235 890 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 ODC1P11926 461 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 LMO2P25791 158 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 ASPAP45381 313 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 GPR15P49685 360 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 MXI1P50539 228 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 ZNF75DP51815 510 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 NTHL1P78549 312 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 FKBP3Q00688 224 aaKnown RBP8.49□□□□□ -1.05
CCDC40-215ENST00000576033 YWHAHQ04917 246 aaPredicted RBP8.49□□□□□ -1.05
CCDC40-215ENST00000576033 LRMPQ12912 555 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 MRPL58Q14197 206 aaKnown RBP8.49□□□□□ -1.05
CCDC40-215ENST00000576033 ZNF699Q32M78 642 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 CCDC40Q4G0X9 1142 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 OVOS1Q6IE37 1185 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 TMC5Q6UXY8 1006 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.49□□□□□ -1.05
CCDC40-215ENST00000576033 LRRTM3Q86VH5 581 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 CREBRFQ8IUR6 639 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 ADGRF2Q8IZF7 708 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 LRRC52Q8N7C0 313 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 MLKLQ8NB16 471 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 TMC2Q8TDI7 906 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 KAT5Q92993 513 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 HLA-CQ95604 372 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 MRFAP1L1Q96HT8 127 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 ZNF560Q96MR9 790 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 TWNKQ96RR1 684 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 HCFC1R1Q9NWW0 138 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 THEGQ9P2T0 379 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 FBXW11Q9UKB1 542 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 AJAP1Q9UKB5 411 aaPredicted RBP8.49□□□□□ -1.05
CCDC40-215ENST00000576033 IRAK3Q9Y616 596 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 PATJQ8NI35 1801 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 COL4A3Q01955 1670 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 MYO16Q9Y6X6 1858 aa8.49□□□□□ -1.05
CCDC40-215ENST00000576033 SYN3O14994 580 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 CCL16O15467 120 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 GLUD1P00367 558 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 CYP11A1P05108 521 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 PDGFRBP09619 1106 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 KRT13P13646 458 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 CPB1P15086 417 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 RPL13P26373 211 aaKnown RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 ERCC5P28715 1186 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 CACNA2D1P54289 1103 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 NOP14P78316 857 aaKnown RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 RBP5P82980 135 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 MYL7Q01449 175 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 POU5F1Q01860 360 aaKnown RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 MYBPC2Q14324 1141 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 WDR72Q3MJ13 1102 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 SLC39A12Q504Y0 691 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 SDHAF4Q5VUM1 108 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 ZNF280DQ6N043 979 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 ANKRD54Q6NXT1 300 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 GJB7Q6PEY0 223 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 LILRA6Q6PI73 481 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 INTS8Q75QN2 995 aaKnown RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 NT5DC4Q86YG4 428 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 GPIHBP1Q8IV16 184 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 ARHGEF19Q8IW93 802 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 TRIM59Q8IWR1 403 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 AOPEPQ8N6M6 819 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 ATAD1Q8NBU5 361 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 KREMEN2Q8NCW0 462 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 SLC7A14Q8TBB6 771 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 GPR152Q8TDT2 470 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 CACTINQ8WUQ7 758 aaKnown RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 TATDN2Q93075 761 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 ZNF707Q96C28 371 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 MMS19Q96T76 1030 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 PKMYT1Q99640 499 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 EMILIN2Q9BXX0 1053 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 S1PR5Q9H228 398 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 TMEM8AQ9HCN3 771 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 CRTAC1Q9NQ79 661 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 TMEM30AQ9NV96 361 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 DDX43Q9NXZ2 648 aaKnown RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 ARMCX3Q9UH62 379 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
CCDC40-215ENST00000576033 USP15Q9Y4E8 981 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-215ENST00000576033 GREB1Q4ZG55 1949 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 BICDL2A1A5D9 508 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 MYBPHLA2RUH7 354 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 MTMR11A4FU01 709 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 SMTNL1A8MU46 457 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 MAPK13O15264 365 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 MBTPS2O43462 519 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 TRAPPC3O43617 180 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 ASS1P00966 412 aaKnown RBP8.47□□□□□ -1.05
CCDC40-215ENST00000576033 ADH1AP07327 375 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 C8AP07357 584 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 ZNF18P17022 549 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 CD58P19256 250 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 TYMPP19971 482 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms