RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 PYROXD1Q8WU10 500 aa15.31■□□□□ 0.04
SCARF1-209ENST00000576012 DDX27Q96GQ7 796 aaKnown RBP15.31■□□□□ 0.04
SCARF1-209ENST00000576012 FAM20AQ96MK3 541 aa15.31■□□□□ 0.04
SCARF1-209ENST00000576012 NAP1L4Q99733 375 aaKnown RBP15.31■□□□□ 0.04
SCARF1-209ENST00000576012 NYXQ9GZU5 481 aa15.31■□□□□ 0.04
SCARF1-209ENST00000576012 PREBQ9HCU5 417 aa15.31■□□□□ 0.04
SCARF1-209ENST00000576012 DMAC2Q9NW81 257 aa15.31■□□□□ 0.04
SCARF1-209ENST00000576012 E5RJQ4 531 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 SORBS2O94875 1100 aaKnown RBP15.3■□□□□ 0.04
SCARF1-209ENST00000576012 LMNAP02545 664 aaKnown RBP15.3■□□□□ 0.04
SCARF1-209ENST00000576012 NSFP46459 744 aaKnown RBP15.3■□□□□ 0.04
SCARF1-209ENST00000576012 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCARF1-209ENST00000576012 LPCAT4Q643R3 524 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 DRAXINQ8NBI3 349 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-209ENST00000576012 ZNF577Q9BSK1 485 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 SLC13A1Q9BZW2 595 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 PPM1HQ9ULR3 514 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 RASA2Q15283 850 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 CTAGE3PQ8IX95 158 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 RIBC1Q8N443 379 aaPredicted RBP15.3■□□□□ 0.04
SCARF1-209ENST00000576012 POU5F2Q8N7G0 328 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 PHF12Q96QT6 1004 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 UNC45AQ9H3U1 944 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 EBF3Q9H4W6 596 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 CYP4F11Q9HBI6 524 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 UVRAGQ9P2Y5 699 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 GGA1Q9UJY5 639 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 CYP3A7-CYP3A51PA0A087WV96 503 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 HNRNPRO43390 633 aaKnown RBP15.3■□□□□ 0.04
SCARF1-209ENST00000576012 FAM155BO75949 473 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 GZMAP12544 262 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 CYP3A7P24462 503 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 SMTNL2Q2TAL5 461 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 MSS51Q4VC12 460 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 ANKRD22Q5VYY1 191 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 TXNRD3NBQ6F5E7 133 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 RIPOR1Q6ZS17 1223 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 PALM2Q8IXS6 379 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 FAM81AQ8TBF8 368 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 NT5C1BQ96P26 610 aa15.3■□□□□ 0.04
SCARF1-209ENST00000576012 SMG5Q9UPR3 1016 aaKnown RBP15.3■□□□□ 0.04
SCARF1-209ENST00000576012 LPXNO60711 386 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 RNASEH1O60930 286 aaKnown RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 KRT1P04264 644 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 HADHBP55084 474 aaKnown RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 RPL7AP62424 266 aaKnown RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 SP4Q02446 784 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 ZNF394Q53GI3 561 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 MFSD7Q6UXD7 560 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 LRRN4Q8WUT4 740 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 ABTB1Q969K4 478 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 GJD4Q96KN9 370 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 ANKRD27Q96NW4 1050 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 PAFAH2Q99487 392 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 TMEM165Q9HC07 324 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 DDX18Q9NVP1 670 aaKnown RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 CHMP2BQ9UQN3 213 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 G3V3G9 751 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 HLA-DOAP06340 250 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 GABPAQ06546 454 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 AP1B1Q10567 949 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 FAM102BQ5T8I3 360 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 RGS9BPQ6ZS82 235 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 ARID3BQ8IVW6 561 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 ZCCHC9Q8N567 271 aaKnown RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 RBM15BQ8NDT2 890 aaKnown RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 PSMC3IPQ9P2W1 217 aaPredicted RBP15.29■□□□□ 0.04
SCARF1-209ENST00000576012 POLLQ9UGP5 575 aa15.29■□□□□ 0.04
SCARF1-209ENST00000576012 TLR3O15455 904 aaKnown RBP15.28■□□□□ 0.04
SCARF1-209ENST00000576012 CREB3O43889 395 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 TYROBPO43914 113 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 HIRAP54198 1017 aaPredicted RBP15.28■□□□□ 0.04
SCARF1-209ENST00000576012 CAV1Q03135 178 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 BTKQ06187 659 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 SLC10A5Q5PT55 438 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 RAPH1Q70E73 1250 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 RASSF3Q86WH2 238 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 TREML1Q86YW5 311 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 MCOLN2Q8IZK6 566 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 GSTCDQ8NEC7 633 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 SNRNP27Q8WVK2 155 aaKnown RBP15.28■□□□□ 0.04
SCARF1-209ENST00000576012 GATA6Q92908 595 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 NACC1Q96RE7 527 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 POLR3CQ9BUI4 534 aaPredicted RBP15.28■□□□□ 0.04
SCARF1-209ENST00000576012 NDE1Q9NXR1 346 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 SLC4A7Q9Y6M7 1214 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 ANKRD36CQ5JPF3 1778 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 PDE5AO76074 875 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 MT-ND3P03897 115 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 ANPEPP15144 967 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 SREBF1P36956 1147 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 GRAPQ13588 217 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 PEX6Q13608 980 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 SNRNP35Q16560 246 aaKnown RBP15.28■□□□□ 0.04
SCARF1-209ENST00000576012 KCNT1Q5JUK3 1230 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 ZCCHC23Q6ZST2 131 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 HAUS6Q7Z4H7 955 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 GRAPLQ8TC17 118 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms