RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	METTL23	Q86XA0	190 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	ADGRF2	Q8IZF7	708 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	CRYBG2	Q8N1P7	616 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	FIBCD1	Q8N539	461 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	SP7	Q8TDD2	431 aa	Predicted RBP	12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	KBTBD7	Q8WVZ9	684 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	RABGGTA	Q92696	567 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	TMEM176A	Q96HP8	235 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	CCDC42	Q96M95	316 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	ZNF558	Q96NG5	402 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	CHP1	Q99653	195 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	NT5C1A	Q9BXI3	368 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	KCNF1	Q9H3M0	494 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	HAUS4	Q9H6D7	363 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	AAAS	Q9NRG9	546 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	STK39	Q9UEW8	545 aa		12.7	□□□□□ -0.38
PRPF8-212	ENST00000575116	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116		A8MXQ7	604 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	ITGB1	P05556	798 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	VDR	P11473	427 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	CYP11B1	P15538	503 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	IGFBP6	P24592	240 aa	Predicted RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	CYLC1	P35663	651 aa	Predicted RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	EIF4A3	P38919	411 aa	Known RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	NDST1	P52848	882 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	RAD23B	P54727	409 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	BMS1	Q14692	1282 aa	Known RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	STIL	Q15468	1287 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	ASTE1	Q2TB18	679 aa	Predicted RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	SPOUT1	Q5T280	376 aa	Known RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	WSCD1	Q658N2	575 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	KCNT2	Q6UVM3	1135 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	SLC47A2	Q86VL8	602 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	COLGALT1	Q8NBJ5	622 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	SLC4A11	Q8NBS3	891 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	OR6B3	Q8NGW1	331 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	EPS8L1	Q8TE68	723 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	CLP1	Q92989	425 aa	Known RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	IGSF21	Q96ID5	467 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	TNIP3	Q96KP6	325 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	ZNF830	Q96NB3	372 aa	Predicted RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	AGPAT1	Q99943	283 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	GDF15	Q99988	308 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	MRPL45	Q9BRJ2	306 aa	Known RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	SYT11	Q9BT88	431 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	OXCT2	Q9BYC2	517 aa	Predicted RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	MARCH5	Q9NX47	278 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	PCDH10	Q9P2E7	1040 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	NOCT	Q9UK39	431 aa	Known RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	STXBP5L	Q9Y2K9	1186 aa		12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	MRPL42	Q9Y6G3	142 aa	Known RBP	12.69	□□□□□ -0.38
PRPF8-212	ENST00000575116	MED7	O43513	233 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	TLL1	O43897	1013 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	OAZ2	O95190	189 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	EFEMP2	O95967	443 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	TNFAIP3	P21580	790 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	PCSK1	P29120	753 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	GNA15	P30679	374 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	PPM1A	P35813	382 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	CDR2	Q01850	454 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	SHH	Q15465	462 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	NOP9	Q86U38	636 aa	Known RBP	12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	THEM5	Q8N1Q8	247 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	SLC39A11	Q8N1S5	342 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	ZNF606	Q8WXB4	792 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	DDX1	Q92499	740 aa	Known RBP	12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	RNPC3	Q96LT9	517 aa	Known RBP	12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	ACBD6	Q9BR61	282 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	ELOVL4	Q9GZR5	314 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	DEF6	Q9H4E7	631 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	SPG21	Q9NZD8	308 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	HCST	Q9UBK5	93 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	CDH9	Q9ULB4	789 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	RWDD3	Q9Y3V2	267 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	PCDHB12	Q9Y5F1	795 aa		12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.68	□□□□□ -0.38
PRPF8-212	ENST00000575116	SOWAHD	A6NJG2	315 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	EIF3CL	B5ME19	914 aa	Known RBP	12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	NT5C1B-RDH14	C9J2C7	533 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116		F8W810	466 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	AKR1B10	O60218	316 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	CAPN15	O75808	1086 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	NDUFA10	O95299	355 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	LCA5L	O95447	670 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	PLEK	P08567	350 aa	Predicted RBP	12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	FGFR3	P22607	806 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	BMP8B	P34820	402 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	MRPL58	Q14197	206 aa	Known RBP	12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	CNGA2	Q16280	664 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	SLC18A3	Q16572	532 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	ZNF394	Q53GI3	561 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	SGO2	Q562F6	1265 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	C9orf50	Q5SZB4	431 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	C10orf76	Q5T2E6	689 aa		12.67	□□□□□ -0.38
PRPF8-212	ENST00000575116	OVOS1	Q6IE37	1185 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms