RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 GARTP22102 1010 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 AVPR2P30518 371 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 POLR2BP30876 1174 aaKnown RBP10.79□□□□□ -0.68
RPA1-206ENST00000573994 AFMP43652 599 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 AMPD3Q01432 767 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 NHLH1Q02575 133 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 FAM26FQ5R3K3 315 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 TPGS2Q68CL5 300 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 SCARA3Q6AZY7 606 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 NELFCDQ8IXH7 590 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 TCEAL8Q8IYN2 117 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 SLC44A3Q8N4M1 653 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 TTC9BQ8N6N2 239 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 TMEM105Q8N8V8 129 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 OR10T2Q8NGX3 314 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 NXPE3Q969Y0 559 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 PYM1Q9BRP8 204 aaKnown RBP10.79□□□□□ -0.68
RPA1-206ENST00000573994 CRISPLD1Q9H336 500 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 TMEM206Q9H813 350 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 ZDHHC9Q9Y397 364 aa10.79□□□□□ -0.68
RPA1-206ENST00000573994 ZFP37Q9Y6Q3 630 aaPredicted RBP10.79□□□□□ -0.68
RPA1-206ENST00000573994 MTMR11A4FU01 709 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 OR6C75A6NL08 312 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 CYB561D2O14569 222 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 EXTL3O43909 919 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 SOAT2O75908 522 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 ITGB3P05106 788 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 SRFP11831 508 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 HOXD13P35453 343 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 CCR2P41597 374 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 TAF6P49848 677 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 TCF15Q12870 199 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 CUL4BQ13620 913 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 STXBP4Q6ZWJ1 553 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 CBWD2Q8IUF1 395 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 C1orf127Q8N9H9 656 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 ATAD1Q8NBU5 361 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 GPR152Q8TDT2 470 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 MCRS1Q96EZ8 462 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 ZNF560Q96MR9 790 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 PRRX2Q99811 253 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 C7orf25Q9BPX7 421 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 MTMR12Q9C0I1 747 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 MAGEF1Q9HAY2 307 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 PDE11AQ9HCR9 933 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 CEP72Q9P209 647 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 SERTAD1Q9UHV2 236 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 CFAP45Q9UL16 551 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 KCNH3Q9ULD8 1083 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 PTPRJQ12913 1337 aa10.78□□□□□ -0.68
RPA1-206ENST00000573994 CACNA1HO95180 2353 aa10.77□□□□□ -0.68
RPA1-206ENST00000573994 DMDP11532 3685 aa10.77□□□□□ -0.68
RPA1-206ENST00000573994 MYO15AQ9UKN7 3530 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 KMT2EQ8IZD2 1858 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 A0A1B0GVL5 298 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 KRBA1A5PL33 1030 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 EIF3DO15371 548 aaKnown RBP eCLIP10.77□□□□□ -0.69
RPA1-206ENST00000573994 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
RPA1-206ENST00000573994 KRT19P08727 400 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 MYL4P12829 197 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 PFKFB1P16118 471 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 GJA1P17302 382 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 RFX1P22670 979 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 CYP2J2P51589 502 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 KRT85P78386 507 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 BFSP1Q12934 665 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 DUSP4Q13115 394 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 SV2CQ496J9 727 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 SLC39A12Q504Y0 691 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 PRSS36Q5K4E3 855 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 WSCD1Q658N2 575 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 CNNM4Q6P4Q7 775 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 UNC13DQ70J99 1090 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 MTSS1LQ765P7 747 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 PDZD4Q76G19 769 aaPredicted RBP10.77□□□□□ -0.69
RPA1-206ENST00000573994 EPM2AIP1Q7L775 607 aaPredicted RBP10.77□□□□□ -0.69
RPA1-206ENST00000573994 CEP57L1Q8IYX8 460 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 GPD1LQ8N335 351 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 ELMOD1Q8N336 334 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 LEO1Q8WVC0 666 aaPredicted RBP10.77□□□□□ -0.69
RPA1-206ENST00000573994 SPATA32Q96LK8 384 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 SEPT5Q99719 369 aaPredicted RBP10.77□□□□□ -0.69
RPA1-206ENST00000573994 RTP3Q9BQQ7 232 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 SLC39A2Q9NP94 309 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 ASAH2Q9NR71 780 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 ARHGEF3Q9NR81 526 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 AGPAT3Q9NRZ7 376 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 FAM86C1Q9NVL1 165 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 HSPBP1Q9NZL4 362 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 RCOR1Q9UKL0 485 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 AGAP1Q9UPQ3 857 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 SLC27A5Q9Y2P5 690 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 TSC2P49815 1807 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 DOCK8Q8NF50 2099 aa10.77□□□□□ -0.69
RPA1-206ENST00000573994 KPNA7A9QM74 516 aa10.76□□□□□ -0.69
RPA1-206ENST00000573994 KIAA0391O15091 583 aaKnown RBP10.76□□□□□ -0.69
RPA1-206ENST00000573994 CLIC2O15247 247 aa10.76□□□□□ -0.69
RPA1-206ENST00000573994 PI15O43692 258 aa10.76□□□□□ -0.69
RPA1-206ENST00000573994 LDHAP00338 332 aaKnown RBP10.76□□□□□ -0.69
RPA1-206ENST00000573994 CYP11A1P05108 521 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms