RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 ATAD1Q8NBU5 361 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 DNAJC25Q9H1X3 360 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 CRISPLD1Q9H336 500 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 USP18Q9UMW8 372 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 C2CD2Q9Y426 696 aa13.19□□□□□ -0.3
CCDC40-210ENST00000573903 EP300Q09472 2414 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-210ENST00000573903 SHISA7A6NL88 538 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 SLC38A8A6NNN8 435 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 PRR5-ARHGAP8B1AHC4 643 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 PPEF2O14830 753 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 VNN2O95498 520 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 CYP11A1P05108 521 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 CDC25CP30307 473 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
CCDC40-210ENST00000573903 TXLNAP40222 546 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 CXCL12P48061 93 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 ACOT2P49753 483 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 TAF6P49848 677 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 ARHGAP8P85298 464 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 GTF2BQ00403 316 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 FCHO2Q0JRZ9 810 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 SMARCB1Q12824 385 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 SLC39A12Q504Y0 691 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 DNAJB7Q7Z6W7 309 aaPredicted RBP13.18□□□□□ -0.3
CCDC40-210ENST00000573903 C2orf15Q8WU43 125 aaKnown RBP13.18□□□□□ -0.3
CCDC40-210ENST00000573903 HVCN1Q96D96 273 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 ZNF560Q96MR9 790 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
CCDC40-210ENST00000573903 LRRC3Q9BY71 257 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 BLOC1S4Q9NUP1 217 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 THG1LQ9NWX6 298 aaKnown RBP13.18□□□□□ -0.3
CCDC40-210ENST00000573903 OBP2AQ9NY56 170 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 DLL3Q9NYJ7 618 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 AGO2Q9UKV8 859 aaKnown RBP13.18□□□□□ -0.3
CCDC40-210ENST00000573903 CDV3Q9UKY7 258 aaKnown RBP13.18□□□□□ -0.3
CCDC40-210ENST00000573903 OTOGLQ3ZCN5 2332 aa13.18□□□□□ -0.3
CCDC40-210ENST00000573903 NCANO14594 1321 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 DCHS1Q96JQ0 3298 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
CCDC40-210ENST00000573903 ARNTLO00327 626 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 PIRO00625 290 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 CYB561D2O14569 222 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 SOAT2O75908 522 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 CHRNB1P11230 501 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 PLCB2Q00722 1185 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 POSTNQ15063 836 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 PTPAQ15257 358 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
CCDC40-210ENST00000573903 SV2CQ496J9 727 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 DGKKQ5KSL6 1271 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 STXBP5Q5T5C0 1151 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 LAIR1Q6GTX8 287 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 SLC39A4Q6P5W5 647 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 PRR23BQ6ZRT6 265 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 RALGPS2Q86X27 583 aaPredicted RBP13.17□□□□□ -0.3
CCDC40-210ENST00000573903 ZNF687Q8N1G0 1237 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 SPEM1Q8N4L4 309 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 TTC9BQ8N6N2 239 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 CELF5Q8N6W0 485 aaKnown RBP13.17□□□□□ -0.3
CCDC40-210ENST00000573903 OR10T2Q8NGX3 314 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 SPPL2BQ8TCT7 592 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 POMGNT1Q8WZA1 660 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 TMEM209Q96SK2 561 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 DPP3Q9NY33 737 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 ZMYM5Q9UJ78 669 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
CCDC40-210ENST00000573903 MED19A0JLT2 244 aaPredicted RBP13.16□□□□□ -0.3
CCDC40-210ENST00000573903 ANO9A1A5B4 782 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 SPECC1L-ADORA2AF8WAN1 911 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 IL18RAPO95256 599 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 CTHP32929 405 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 DDIT3P35638 169 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 CYP4F8P98187 520 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 SATB1Q01826 763 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 POU5F1Q01860 360 aaKnown RBP13.16□□□□□ -0.3
CCDC40-210ENST00000573903 ZC2HC1CQ53FD0 456 aaPredicted RBP13.16□□□□□ -0.3
CCDC40-210ENST00000573903 GAREM2Q75VX8 874 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 NT5DC4Q86YG4 428 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 GPIHBP1Q8IV16 184 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 DCP1BQ8IZD4 617 aaKnown RBP13.16□□□□□ -0.3
CCDC40-210ENST00000573903 BPIFB1Q8TDL5 484 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 LRRC15Q8TF66 581 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 RSPRY1Q96DX4 576 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 LPIN3Q9BQK8 851 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 CCSER1Q9C0I3 900 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 ZCWPW1Q9H0M4 648 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 ST6GALNAC4Q9H4F1 302 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 TASP1Q9H6P5 420 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 ABI2Q9NYB9 513 aaPredicted RBP13.16□□□□□ -0.3
CCDC40-210ENST00000573903 SEL1LQ9UBV2 794 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 STK17AQ9UEE5 414 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 SCN1AP35498 2009 aa13.16□□□□□ -0.3
CCDC40-210ENST00000573903 F5P12259 2224 aa13.15□□□□□ -0.3
CCDC40-210ENST00000573903 MYBPHLA2RUH7 354 aa13.15□□□□□ -0.3
CCDC40-210ENST00000573903 ANKRD63C9JTQ0 380 aa13.15□□□□□ -0.3
CCDC40-210ENST00000573903 TDGF1P13385 188 aa13.15□□□□□ -0.3
CCDC40-210ENST00000573903 SYT1P21579 422 aa13.15□□□□□ -0.3
CCDC40-210ENST00000573903 CNR2P34972 360 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms