RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 OXCT2Q9BYC2 517 aaPredicted RBP13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 TRIM5Q9C035 493 aa13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 XPO4Q9C0E2 1151 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 XYLT2Q9H1B5 865 aa13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 VRTNQ9H8Y1 702 aa13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 RXFP1Q9HBX9 757 aa13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 FNIP2Q9P278 1114 aa13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 NXF1Q9UBU9 619 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 PCDHGC5Q9Y5F6 944 aa13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 TIMM13Q9Y5L4 95 aaPredicted RBP13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 BACE2Q9Y5Z0 518 aa13.83□□□□□ -0.2
NPLOC4-214ENST00000573876 GTPBP10A4D1E9 387 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 CBFA2T2O43439 604 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 LILRB3O75022 631 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 ASS1P00966 412 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 CYP11A1P05108 521 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 NRIP1P48552 1158 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 GSE1Q14687 1217 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 SYCP1Q15431 976 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 CTXN3Q4LDR2 81 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 PRSS55Q6UWB4 352 aaPredicted RBP13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 RBM23Q86U06 439 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 LNX1Q8TBB1 728 aaPredicted RBP13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 SPATA18Q8TC71 538 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 KLHL5Q96PQ7 755 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 INTS2Q9H0H0 1204 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 IGFLR1Q9H665 355 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 GCNT4Q9P109 453 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 MTRRQ9UBK8 725 aa13.82□□□□□ -0.2
NPLOC4-214ENST00000573876 OR6C75A6NL08 312 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 PER2O15055 1255 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 TEX28O15482 410 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 OAZ2O95190 189 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 TPM3P06753 285 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 CNPP09543 421 aaKnown RBP13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 FAM163BP0C2L3 166 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 SRGAP2BP0DMP2 458 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 LHX1P48742 406 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 NDUFV1P49821 464 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 KLK7P49862 253 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 APBA1Q02410 837 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 MRPL58Q14197 206 aaKnown RBP13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 SKIV2LQ15477 1246 aaKnown RBP13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 CCDC85BQ15834 202 aaPredicted RBP13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 DUSP6Q16828 381 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 WSCD1Q658N2 575 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 PHLDB3Q6NSJ2 640 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 ELMSAN1Q6PJG2 1045 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 SARM1Q6SZW1 724 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 ADGRF2Q8IZF7 708 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 PPM1EQ8WY54 764 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 SNX25Q9H3E2 840 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 APOBEC3GQ9HC16 384 aaKnown RBP13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 UBE2TQ9NPD8 197 aaPredicted RBP13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 L1RE1Q9UN81 338 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 POLIQ9UNA4 740 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 STXBP5LQ9Y2K9 1186 aa13.81□□□□□ -0.2
NPLOC4-214ENST00000573876 VWA8A3KMH1 1905 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 WEE2P0C1S8 567 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 RPL17P18621 184 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 OR1D2P34982 312 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 CDH8P55286 799 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 NOP14P78316 857 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 TRIM65Q6PJ69 517 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 RRAGAQ7L523 313 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 ADGRD2Q7Z7M1 963 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 GLYCTKQ8IVS8 523 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 NT5C1BQ96P26 610 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 ERGIC2Q96RQ1 377 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 LSM14BQ9BX40 385 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 DNAI2Q9GZS0 605 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 NIF3L1Q9GZT8 377 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 GRPEL1Q9HAV7 217 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 DPP7Q9UHL4 492 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 FBXL5Q9UKA1 691 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 CDY1Q9Y6F8 540 aa13.8□□□□□ -0.2
NPLOC4-214ENST00000573876 A0A1W2PQC6 194 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 TACC1O75410 805 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 GLUD1P00367 558 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 C1RP00736 705 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 CPB1P15086 417 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 TRIM21P19474 475 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 PCSK1P29120 753 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 ARPP19P56211 112 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 TSPY1Q01534 308 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 HYAL1Q12794 435 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 SOWAHAQ2M3V2 549 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 KLHDC7AQ5VTJ3 777 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 DPY19L2P1Q6NXN4 242 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 GJB7Q6PEY0 223 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 SCARA5Q6ZMJ2 495 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 PALB2Q86YC2 1186 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 ARHGEF19Q8IW93 802 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 PPM1KQ8N3J5 372 aa13.79□□□□□ -0.2
NPLOC4-214ENST00000573876 EFHBQ8N7U6 833 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms