RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	TNNI1	P19237	187 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	AVPR2	P30518	371 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	HOXD13	P35453	343 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	NDUFA8	P51970	172 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	SMARCB1	Q12824	385 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	DUOXA2	Q1HG44	320 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	BMT2	Q1RMZ1	405 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	SLC5A9	Q2M3M2	681 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	KMT5B	Q4FZB7	885 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	SLC39A12	Q504Y0	691 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	WSCD1	Q658N2	575 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	LMBRD2	Q68DH5	695 aa	Predicted RBP	12.86	□□□□□ -0.35
ABR-222	ENST00000573667	CENPP	Q6IPU0	288 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	PARM1	Q6UWI2	310 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	WDR49	Q8IV35	697 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	DCP1B	Q8IZD4	617 aa	Known RBP	12.86	□□□□□ -0.35
ABR-222	ENST00000573667	SIX5	Q8N196	739 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	FSIP1	Q8NA03	581 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	FLCN	Q8NFG4	579 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	ST13P5	Q8NFI4	369 aa	Predicted RBP	12.86	□□□□□ -0.35
ABR-222	ENST00000573667	GOLGA5	Q8TBA6	731 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	C2orf15	Q8WU43	125 aa	Known RBP	12.86	□□□□□ -0.35
ABR-222	ENST00000573667	FGF14	Q92915	247 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	MCRS1	Q96EZ8	462 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	TMEM209	Q96SK2	561 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	ZCWPW1	Q9H0M4	648 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	INTS13	Q9NVM9	706 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	GDE1	Q9NZC3	331 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	HSFX1	Q9UBD0	423 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	PTPRD	P23468	1912 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667	GREB1	Q4ZG55	1949 aa		12.86	□□□□□ -0.35
ABR-222	ENST00000573667		A0A1W2PQ27	194 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667		A0A1W2PQ64	194 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667		A0A1W2PQD8	194 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	GOLGA6L4	A6NEF3	574 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	KLRC4	O43908	158 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	EXOC3	O60645	756 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	MICAL2	O94851	1124 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	KIF20A	O95235	890 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	DLAT	P10515	647 aa	Known RBP	12.85	□□□□□ -0.35
ABR-222	ENST00000573667	CEBPB	P17676	345 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	TUFM	P49411	452 aa	Known RBP	12.85	□□□□□ -0.35
ABR-222	ENST00000573667	VCP	P55072	806 aa	Known RBP	12.85	□□□□□ -0.35
ABR-222	ENST00000573667	MYL7	Q01449	175 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	TSPY1	Q01534	308 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	VEPH1	Q14D04	833 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	MGAT5B	Q3V5L5	792 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	PRSS36	Q5K4E3	855 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	ITIH5	Q86UX2	942 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	TMEM86A	Q8N2M4	240 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	ATAD1	Q8NBU5	361 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	OR10T2	Q8NGX3	314 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	FAM200A	Q8TCP9	573 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	SPPL2B	Q8TCT7	592 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	GPR152	Q8TDT2	470 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	BORCS6	Q96GS4	357 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	SEPT5	Q99719	369 aa	Predicted RBP	12.85	□□□□□ -0.35
ABR-222	ENST00000573667	CEP72	Q9P209	647 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	CA14	Q9ULX7	337 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	SLC27A5	Q9Y2P5	690 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	ASB3	Q9Y575	518 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	SNX9	Q9Y5X1	595 aa		12.85	□□□□□ -0.35
ABR-222	ENST00000573667	FAM237A	A0A1B0GTK4	181 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	RPN1	P04843	607 aa	Known RBP	12.84	□□□□□ -0.35
ABR-222	ENST00000573667	CLCN5	P51795	746 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	NUBP1	P53384	320 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	CYP24A1	Q07973	514 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	STK4	Q13043	487 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	PSMD6	Q15008	389 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	TAF12	Q16514	161 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	ASTL	Q6HA08	431 aa	Predicted RBP	12.84	□□□□□ -0.35
ABR-222	ENST00000573667	KRBA2	Q6ZNG9	492 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	C12orf56	Q8IXR9	622 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	HS6ST3	Q8IZP7	471 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	PDCL2	Q8N4E4	241 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	OR5B17	Q8NGF7	314 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	CCDC127	Q96BQ5	260 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	HPDL	Q96IR7	371 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	CGRRF1	Q99675	332 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	KXD1	Q9BQD3	176 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	GPR88	Q9GZN0	384 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	CRISPLD1	Q9H336	500 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	SLITRK6	Q9H5Y7	841 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	GDPD2	Q9HCC8	539 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	SLC2A4RG	Q9NR83	387 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	GDAP2	Q9NXN4	497 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	DDX43	Q9NXZ2	648 aa	Known RBP	12.84	□□□□□ -0.35
ABR-222	ENST00000573667	ABI2	Q9NYB9	513 aa	Predicted RBP	12.84	□□□□□ -0.35
ABR-222	ENST00000573667	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.84	□□□□□ -0.35
ABR-222	ENST00000573667	PTPRJ	Q12913	1337 aa		12.84	□□□□□ -0.35
ABR-222	ENST00000573667	ECI2	O75521	394 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	CLSTN1	O94985	981 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	ZNF202	O95125	648 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	VNN2	O95498	520 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	FGF19	O95750	216 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	LHX1	P48742	406 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	PTPN5	P54829	565 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	GPC5	P78333	572 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	PFKP	Q01813	784 aa		12.83	□□□□□ -0.36
ABR-222	ENST00000573667	NFE2	Q16621	373 aa	Predicted RBP	12.83	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms