RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 ING5Q8WYH8 240 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 ACSF2Q96CM8 615 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 TCEAL4Q96EI5 215 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 ZNF560Q96MR9 790 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 C1QTNF1Q9BXJ1 281 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 ZCWPW1Q9H0M4 648 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 DNAJC25Q9H1X3 360 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 KCNK12Q9HB15 430 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 GDAP2Q9NXN4 497 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 CHMP5Q9NZZ3 219 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 CGNQ9P2M7 1197 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 TRAF3IP3Q9Y228 551 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 NME7Q9Y5B8 376 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 SNX9Q9Y5X1 595 aa11.02□□□□□ -0.65
GTF3C1-213ENST00000571886 NARSO43776 548 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 XYLBO75191 536 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 MOSPD3O75425 235 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 TNNC2P02585 160 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 LRG1P02750 347 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 C4BPAP04003 597 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 POU2F2P09086 479 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 LAMP2P13473 410 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 GJA1P17302 382 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 PAX3P23760 479 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 PNPLA4P41247 253 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 PRCPP42785 496 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 PABPC1LQ4VXU2 614 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 SLC39A12Q504Y0 691 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 ZCWPW2Q504Y3 356 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 PRSS36Q5K4E3 855 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 CEP135Q66GS9 1140 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 HFE2Q6ZVN8 426 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 RTL10Q7L3V2 364 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 LIMS2Q7Z4I7 341 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 METTL23Q86XA0 190 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 GUF1Q8N442 669 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 SPATA20Q8TB22 786 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 TMEM174Q8WUU8 243 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 KBTBD7Q8WVZ9 684 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 FGF13Q92913 245 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 ASIC4Q96FT7 647 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 EEF2KMTQ96G04 330 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 HPDLQ96IR7 371 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 TIGD1Q96MW7 591 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 FNBP1Q96RU3 617 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 CORO1BQ9BR76 489 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 LRRC3Q9BY71 257 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 DDX43Q9NXZ2 648 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 EPS15L1Q9UBC2 864 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 DSEQ9UL01 958 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 YIPF1Q9Y548 306 aa11.01□□□□□ -0.65
GTF3C1-213ENST00000571886 TMEM221A6NGB7 291 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 M0R296 226 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 GABRDO14764 452 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 CALUO43852 315 aaPredicted RBP11□□□□□ -0.65
GTF3C1-213ENST00000571886 ATP2C2O75185 946 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 AKAP3O75969 853 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 VNN1O95497 513 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 PDGFBP01127 241 aaPredicted RBP11□□□□□ -0.65
GTF3C1-213ENST00000571886 CEBPBP17676 345 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 PTPN2P17706 415 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 LMO2P25791 158 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 GPR15P49685 360 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 PMS1P54277 932 aaKnown RBP11□□□□□ -0.65
GTF3C1-213ENST00000571886 MYL6P60660 151 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 CLDN10P78369 228 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 TDRD10Q5VZ19 366 aaKnown RBP11□□□□□ -0.65
GTF3C1-213ENST00000571886 PARM1Q6UWI2 310 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 THEM5Q8N1Q8 247 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 STKLD1Q8NE28 680 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 GOLGA5Q8TBA6 731 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 FGF14Q92915 247 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 CCDC47Q96A33 483 aaKnown RBP11□□□□□ -0.65
GTF3C1-213ENST00000571886 MCRS1Q96EZ8 462 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 PKMYT1Q99640 499 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 LPIN3Q9BQK8 851 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 MRPL45Q9BRJ2 306 aaKnown RBP11□□□□□ -0.65
GTF3C1-213ENST00000571886 OXCT2Q9BYC2 517 aaPredicted RBP11□□□□□ -0.65
GTF3C1-213ENST00000571886 XYLT2Q9H1B5 865 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 ZNF334Q9HCZ1 680 aaPredicted RBP11□□□□□ -0.65
GTF3C1-213ENST00000571886 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11□□□□□ -0.65
GTF3C1-213ENST00000571886 CDH7Q9ULB5 785 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 SORCS3Q9UPU3 1222 aa11□□□□□ -0.65
GTF3C1-213ENST00000571886 MYBPHLA2RUH7 354 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 ANHXE9PGG2 379 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 HUS1O60921 280 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 LRRN2O75325 713 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 CD44P16070 742 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 ATF6P18850 670 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 COL9A1P20849 921 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 BMP6P22004 513 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 NR2F2P24468 414 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 SIGLEC14Q08ET2 396 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 NFIL3Q16649 462 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 ZNF658Q5TYW1 1059 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 SDHAF4Q5VUM1 108 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 TMC8Q8IU68 726 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 NPAS3Q8IXF0 933 aa10.99□□□□□ -0.65
GTF3C1-213ENST00000571886 ADGRF2Q8IZF7 708 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms