RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GTF2BQ00403 316 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 TNK2Q07912 1038 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 DMWDQ09019 674 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 SRSF5Q13243 272 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 PLD1Q13393 1074 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 MYBPC2Q14324 1141 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 PUM1Q14671 1186 aaKnown RBP eCLIP9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 KYAT1Q16773 422 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 WDR44Q5JSH3 913 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 WSCD1Q658N2 575 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 TXNDC11Q6PKC3 985 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 PRR23BQ6ZRT6 265 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 Q6ZS52 159 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 LRRTM3Q86VH5 581 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 SFR1Q86XK3 245 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 KCTD17Q8N5Z5 321 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 STKLD1Q8NE28 680 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 NELL1Q92832 810 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 PSMG2Q969U7 264 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 PYM1Q9BRP8 204 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 MKNK1Q9BUB5 465 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 EPC1Q9H2F5 836 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 TRPV4Q9HBA0 871 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 C2orf42Q9NWW7 574 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 DPP3Q9NY33 737 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 TBC1D7Q9P0N9 293 aa9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 CNOT1A5YKK6 2376 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-203ENST00000570385 DMXL1Q9Y485 3027 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 ANO9A1A5B4 782 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 VPS37CA5D8V6 355 aaPredicted RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 CHADO15335 359 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 PRAMEF12O95522 483 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 TDGF1P13385 188 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 LONP1P36776 959 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 CXCL12P48061 93 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 CCR3P51677 355 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 CEBPZQ03701 1054 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 KCNA1Q09470 495 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 SPEM2Q0P670 501 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 PON2Q15165 354 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 TAF12Q16514 161 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 SDHAF4Q5VUM1 108 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 SCARA3Q6AZY7 606 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 FAM173BQ6P4H8 233 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 METTL23Q86XA0 190 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 EFCAB13Q8IY85 973 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 KRI1Q8N9T8 703 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 ZSWIM2Q8NEG5 633 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 NOC3LQ8WTT2 800 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 POMGNT1Q8WZA1 660 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 LARP4BQ92615 738 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 SECISBP2LQ93073 1101 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 CLIC6Q96NY7 704 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 OXCT2Q9BYC2 517 aaPredicted RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 GPR88Q9GZN0 384 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 ZCWPW1Q9H0M4 648 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 PARD6AQ9NPB6 346 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 TRPV5Q9NQA5 729 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 ABI2Q9NYB9 513 aaPredicted RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 DLL3Q9NYJ7 618 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 AGO2Q9UKV8 859 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 CLIC4Q9Y696 253 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 CACNA1BQ00975 2339 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 COL4A2P08572 1712 aa9.31□□□□□ -0.92
CTDNEP1-203ENST00000570385 DCDC2BA2VCK2 349 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 GOLGA8IPA6NC78 632 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 GOLGA8JA6NMD2 632 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 SPECC1L-ADORA2AF8WAN1 911 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 SLC26A4O43511 780 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 HRO43593 1189 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 CYP11A1P05108 521 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 ADSSP30520 456 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 CTHP32929 405 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 DDIT3P35638 169 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 GPR15P49685 360 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 TAF6P49848 677 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 ATXN1P54253 815 aaKnown RBP9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 WNT7BP56706 349 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 TFAMQ00059 246 aaKnown RBP9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 FCHO2Q0JRZ9 810 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 VEPH1Q14D04 833 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 ARHGAP15Q53QZ3 475 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 SLFN12LQ6IEE8 588 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 CRELD2Q6UXH1 353 aaPredicted RBP9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 ITIH5Q86UX2 942 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 CD302Q8IX05 232 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 THEM5Q8N1Q8 247 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 TTC16Q8NEE8 873 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 KCNN1Q92952 543 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 E2F7Q96AV8 911 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 SAAL1Q96ER3 474 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 FAM213AQ9BRX8 229 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 SLC46A2Q9BY10 475 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 PANK2Q9BZ23 570 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 ASB7Q9H672 318 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 TASP1Q9H6P5 420 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 MRPL44Q9H9J2 332 aaKnown RBP9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 UPF2Q9HAU5 1272 aaKnown RBP9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 IL21Q9HBE4 155 aa9.3□□□□□ -0.92
CTDNEP1-203ENST00000570385 TMLHEQ9NVH6 421 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms