RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 IGSF9Q9P2J2 1179 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 RAPGEFL1Q9UHV5 662 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 CDH7Q9ULB5 785 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 CIZ1Q9ULV3 898 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-220ENST00000569916 L1RE1Q9UN81 338 aa14.03□□□□□ -0.16
CNOT1-220ENST00000569916 ZFP37Q9Y6Q3 630 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-220ENST00000569916 OBSL1O75147 1896 aa14.02□□□□□ -0.16
CNOT1-220ENST00000569916 GOLGA6L4A6NEF3 574 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 ANHXE9PGG2 379 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 PRPF40AO75400 957 aaKnown RBP14.02□□□□□ -0.17
CNOT1-220ENST00000569916 PTPN2P17706 415 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 FAM160A1Q05DH4 1040 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 DUSP4Q13115 394 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 TDGQ13569 410 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 HTR4Q13639 388 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 SLC39A12Q504Y0 691 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 PRSS36Q5K4E3 855 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 CENPPQ6IPU0 288 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 TRAPPC11Q7Z392 1133 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 BMP8AQ7Z5Y6 402 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 NPAS3Q8IXF0 933 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 THEM5Q8N1Q8 247 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 PDCL2Q8N4E4 241 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 ATAD1Q8NBU5 361 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 PLEKHO2Q8TD55 490 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 RSAD2Q8WXG1 361 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 ING5Q8WYH8 240 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 CCDC34Q96HJ3 373 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 FNBP1Q96RU3 617 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 CORO1BQ9BR76 489 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 DNAJC25Q9H1X3 360 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 DUSP12Q9UNI6 340 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 SNX9Q9Y5X1 595 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 PTPRDP23468 1912 aa14.02□□□□□ -0.17
CNOT1-220ENST00000569916 ZNF318Q5VUA4 2279 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 NRG2O14511 850 aaPredicted RBP14.01□□□□□ -0.17
CNOT1-220ENST00000569916 HUS1O60921 280 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 KIF20AO95235 890 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 NR3C1P04150 777 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 TNNI1P19237 187 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 CCR2P41597 374 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 CASP4P49662 377 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 MYO1EQ12965 1108 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 PNOCQ13519 176 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 LRRTM3Q86VH5 581 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 OSTM1Q86WC4 334 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 GUF1Q8N442 669 aaKnown RBP14.01□□□□□ -0.17
CNOT1-220ENST00000569916 TOP6BLQ8N6T0 577 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 ZNF516Q92618 1163 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 NXPE3Q969Y0 559 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 HPDLQ96IR7 371 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 HSFX1Q9UBD0 423 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 MAPK8IP1Q9UQF2 711 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 TRAF3IP3Q9Y228 551 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 SLC27A5Q9Y2P5 690 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 MRPS23Q9Y3D9 190 aaKnown RBP14.01□□□□□ -0.17
CNOT1-220ENST00000569916 NUMBLQ9Y6R0 609 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 DENND4CQ5VZ89 1909 aa14.01□□□□□ -0.17
CNOT1-220ENST00000569916 NUP210Q8TEM1 1887 aaPredicted RBP14□□□□□ -0.17
CNOT1-220ENST00000569916 NARSO43776 548 aaKnown RBP14□□□□□ -0.17
CNOT1-220ENST00000569916 CALUO43852 315 aaPredicted RBP14□□□□□ -0.17
CNOT1-220ENST00000569916 SOAT2O75908 522 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 CST3P01034 146 aaPredicted RBP14□□□□□ -0.17
CNOT1-220ENST00000569916 CEBPBP17676 345 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 CDR1P51861 262 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 EPHA5P54756 1037 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 PLD1Q13393 1074 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 SOWAHAQ2M3V2 549 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 IQCEQ6IPM2 695 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 POTEHQ6S545 545 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 PARM1Q6UWI2 310 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 PDZD4Q76G19 769 aaPredicted RBP14□□□□□ -0.17
CNOT1-220ENST00000569916 LIMS2Q7Z4I7 341 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 ADGRF2Q8IZF7 708 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 HS6ST3Q8IZP7 471 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 TMEM86AQ8N2M4 240 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 ELMOD1Q8N336 334 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 SLC44A3Q8N4M1 653 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 ST13P5Q8NFI4 369 aaPredicted RBP14□□□□□ -0.17
CNOT1-220ENST00000569916 SPATA18Q8TC71 538 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 PARD3BQ8TEW8 1205 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 FGF14Q92915 247 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 PBXIP1Q96AQ6 731 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 TCEAL4Q96EI5 215 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 ZNF512Q96ME7 567 aaPredicted RBP14□□□□□ -0.17
CNOT1-220ENST00000569916 TMLHEQ9NVH6 421 aa14□□□□□ -0.17
CNOT1-220ENST00000569916 DDX43Q9NXZ2 648 aaKnown RBP14□□□□□ -0.17
CNOT1-220ENST00000569916 R3HCC1Q9Y3T6 440 aaKnown RBP14□□□□□ -0.17
CNOT1-220ENST00000569916 LRRIQ3A6PVS8 624 aaPredicted RBP13.99□□□□□ -0.17
CNOT1-220ENST00000569916 GABRDO14764 452 aa13.99□□□□□ -0.17
CNOT1-220ENST00000569916 HCRTO43612 131 aa13.99□□□□□ -0.17
CNOT1-220ENST00000569916 MOSPD3O75425 235 aa13.99□□□□□ -0.17
CNOT1-220ENST00000569916 PDGFBP01127 241 aaPredicted RBP13.99□□□□□ -0.17
CNOT1-220ENST00000569916 ACAT1P24752 427 aaKnown RBP13.99□□□□□ -0.17
CNOT1-220ENST00000569916 CLDN10P78369 228 aa13.99□□□□□ -0.17
CNOT1-220ENST00000569916 MYL7Q01449 175 aa13.99□□□□□ -0.17
CNOT1-220ENST00000569916 SMARCB1Q12824 385 aa13.99□□□□□ -0.17
CNOT1-220ENST00000569916 NFIL3Q16649 462 aa13.99□□□□□ -0.17
CNOT1-220ENST00000569916 ZCWPW2Q504Y3 356 aa13.99□□□□□ -0.17
CNOT1-220ENST00000569916 TDRD10Q5VZ19 366 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms