RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 GDI1P31150 447 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 HOXD13P35453 343 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 E2F4Q16254 413 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 SLC39A12Q504Y0 691 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 SLFN12LQ6IEE8 588 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 IQCEQ6IPM2 695 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 SV2BQ7L1I2 683 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 DNAJB7Q7Z6W7 309 aaPredicted RBP14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 BRSK2Q8IWQ3 736 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 PDILTQ8N807 584 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 STKLD1Q8NE28 680 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 POMGNT1Q8WZA1 660 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 DNASE1L2Q92874 299 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 FAM213AQ9BRX8 229 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 OSBPL6Q9BZF3 934 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 OLFML3Q9NRN5 406 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 SPATA6Q9NWH7 488 aaPredicted RBP14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 CCDC39Q9UFE4 941 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 PTPRDP23468 1912 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 ANAPC1Q9H1A4 1944 aa14.97□□□□□ -0.01
GTF3C1-211ENST00000569653 PTPRJQ12913 1337 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 HEPACAM2A8MVW5 462 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 CYB561D2O14569 222 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 HCRTO43612 131 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 STX6O43752 255 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 PRPF6O94906 941 aaKnown RBP14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 PRAMEF12O95522 483 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 GAP43P17677 238 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 TSSK4Q6SA08 328 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 HSCBQ8IWL3 235 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 ELMOD1Q8N336 334 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 C1orf127Q8N9H9 656 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 SUMF1Q8NBK3 374 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 LEMD2Q8NC56 503 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 LINC00301Q8NCQ3 95 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 SNX21Q969T3 373 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 PSMG2Q969U7 264 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 PYM1Q9BRP8 204 aaKnown RBP14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 TRMT61BQ9BVS5 477 aaKnown RBP14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 OXCT2Q9BYC2 517 aaPredicted RBP14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 BRD9Q9H8M2 597 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 TFIP11Q9UBB9 837 aaKnown RBP14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 SEL1LQ9UBV2 794 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 SIX4Q9UIU6 781 aa14.96□□□□□ -0.01
GTF3C1-211ENST00000569653 GCNT3O95395 438 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 TDGF1P13385 188 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 IDEP14735 1019 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 PSMC3P17980 439 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 HOXC13P31276 330 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 STAT6P42226 847 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 SOX9P48436 509 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 GPR15P49685 360 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 TAF6P49848 677 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 EPHB3P54753 998 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 CYP4F8P98187 520 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 POU5F1Q01860 360 aaKnown RBP14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 CCDC73Q6ZRK6 1079 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 TMEM150AQ86TG1 271 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 OSTM1Q86WC4 334 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 ARID3BQ8IVW6 561 aaPredicted RBP14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 MFSD6LQ8IWD5 586 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 DCLK2Q8N568 766 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 NELL1Q92832 810 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 ZFYVE19Q96K21 471 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 ACCSQ96QU6 501 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 BCO2Q9BYV7 579 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 ATG2BQ96BY7 2078 aa14.95□□□□□ -0.02
GTF3C1-211ENST00000569653 KPNA7A9QM74 516 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 LMNAP02545 664 aaKnown RBP14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 GABRR2P28476 465 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 POLR2BP30876 1174 aaKnown RBP14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 ABCD1P33897 745 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 ALDH1A3P47895 512 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 TFAMQ00059 246 aaKnown RBP14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 MTAPQ13126 283 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 GAS6Q14393 721 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 TXNDC11Q6PKC3 985 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 SHC4Q6S5L8 630 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 ZNF852Q6ZMS4 543 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 PDCL2Q8N4E4 241 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 RIN3Q8TB24 985 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 GIPC2Q8TF65 315 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 DEPDC1BQ8WUY9 529 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 PKMYT1Q99640 499 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 SEPT5Q99719 369 aaPredicted RBP14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 SMG9Q9H0W8 520 aaKnown RBP14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 PCIF1Q9H4Z3 704 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 SLITRK6Q9H5Y7 841 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 PDE11AQ9HCR9 933 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 TRPV5Q9NQA5 729 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 PRMT8Q9NR22 394 aaPredicted RBP14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 PANK4Q9NVE7 773 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 NDRG2Q9UN36 371 aaKnown RBP14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 L1RE1Q9UN81 338 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 PIAS3Q9Y6X2 628 aa14.94□□□□□ -0.02
GTF3C1-211ENST00000569653 IL18RAPO95256 599 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 ITGB3P05106 788 aa14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 HAPLN1P10915 354 aaPredicted RBP14.93□□□□□ -0.02
GTF3C1-211ENST00000569653 HMGA1P17096 107 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms