RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 SOX4Q06945 474 aaPredicted RBP23.97■■□□□ 1.43
VCPKMT-205ENST00000569518 C2CD6Q53TS8 623 aa23.97■■□□□ 1.43
VCPKMT-205ENST00000569518 FBXO38Q6PIJ6 1188 aa23.97■■□□□ 1.43
VCPKMT-205ENST00000569518 WDTC1Q8N5D0 677 aa23.97■■□□□ 1.43
VCPKMT-205ENST00000569518 A0A1W2PQ45 241 aaPredicted RBP23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 A0A1W2PQY0 241 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 XPOTO43592 962 aaKnown RBP23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 CAND2O75155 1236 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 RBM10P98175 930 aaKnown RBP23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 LPIN1Q14693 890 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 PLEKHA7Q6IQ23 1121 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 TMEM35BQ8NCS4 154 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 C1orf131Q8NDD1 294 aaKnown RBP23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 UBE2Q2Q8WVN8 375 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 TRAIPQ9BWF2 469 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 LHX5Q9H2C1 402 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 PADI3Q9ULW8 664 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 NOD1Q9Y239 953 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 MED7O43513 233 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 CD19P15391 556 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 CD52P31358 61 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 NDST1P52848 882 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 C2orf54Q08AI8 447 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 ORC1Q13415 861 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 MESDQ14696 234 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 LIN9Q5TKA1 542 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 LLGL2Q6P1M3 1020 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 MMGT1Q8N4V1 131 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 CD101Q93033 1021 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 BTBD6Q96KE9 485 aa23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 PPP1R10Q96QC0 940 aaKnown RBP23.96■■□□□ 1.43
VCPKMT-205ENST00000569518 MEIS3P2A8K0S8 358 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 GHRP10912 638 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 COMTP21964 271 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 DSC3Q14574 896 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 DCAF12L1Q5VU92 463 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 DENND1BQ6P3S1 775 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 RASGEF1CQ8N431 466 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 ACTRT1Q8TDG2 376 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 ZFP42Q96MM3 310 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 PARD6BQ9BYG5 372 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 TRIM17Q9Y577 477 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 SNX9Q9Y5X1 595 aa23.95■■□□□ 1.42
VCPKMT-205ENST00000569518 MIF4GDA9UHW6 222 aaKnown RBP23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 ATF7P17544 494 aaPredicted RBP23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 PAK2Q13177 524 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 MAMLD1Q13495 774 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 MRPL10Q7Z7H8 261 aaKnown RBP23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 GSTCDQ8NEC7 633 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 ANAPC7Q9UJX3 599 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 PHF24Q9UPV7 400 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 SQORQ9Y6N5 450 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 TMEM110-MUSTN1A8MSY1 372 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 MGEA5O60502 916 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 PNPLA4P41247 253 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 ZNF618Q5T7W0 954 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 TRAF7Q6Q0C0 670 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 ALG3Q92685 438 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 ZNF560Q96MR9 790 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 MRPL45Q9BRJ2 306 aaKnown RBP23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 TRIM7Q9C029 511 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 TRPV6Q9H1D0 765 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 GOLGA2P5Q9HBQ8 144 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 GDAP2Q9NXN4 497 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 CEP83Q9Y592 693 aa23.94■■□□□ 1.42
VCPKMT-205ENST00000569518 TCRBV5S1A1TA0A578 114 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 O00370 1275 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 SPTLC1O15269 473 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 CALB1P05937 261 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 RHOXF2BP0C7M4 288 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 VDRP11473 427 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 ITGA4P13612 1032 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 LRPAP1P30533 357 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 LIMS2Q7Z4I7 341 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 HACE1Q8IYU2 909 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 USP38Q8NB14 1042 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 PNKPQ96T60 521 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 RHOXF2Q9BQY4 288 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 SELENOOQ9BVL4 669 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 NT5C1AQ9BXI3 368 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 CARD9Q9H257 536 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 RBM12Q9NTZ6 932 aaKnown RBP23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 KIAA1257Q9ULG3 409 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 SCINQ9Y6U3 715 aa23.93■■□□□ 1.42
VCPKMT-205ENST00000569518 A0A0U1RQG5 324 aaPredicted RBP23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 CEP104O60308 925 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 ZNF623O75123 536 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 CNGA2Q16280 664 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 SOWAHAQ2M3V2 549 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 PHLDB2Q86SQ0 1253 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 CPNE8Q86YQ8 564 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 SH3TC2Q8TF17 1288 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 MRPL47Q9HD33 250 aaKnown RBP23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 STARD7Q9NQZ5 370 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 CYTH4Q9UIA0 394 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 TMEM59LQ9UK28 342 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 RAB21Q9UL25 225 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 TTC7AQ9ULT0 858 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms