RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 RNF19BQ6ZMZ0 732 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 SV2AQ7L0J3 742 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 TMEM86AQ8N2M4 240 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 TOP6BLQ8N6T0 577 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 CCDC150Q8NCX0 1101 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 OR10T2Q8NGX3 314 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 ZNF461Q8TAF7 563 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 CXorf38Q8TB03 319 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 BORCS6Q96GS4 357 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 CEP63Q96MT8 703 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 UHRF1Q96T88 793 aaPredicted RBP13.75□□□□□ -0.21
CDT1-203ENST00000569140 IMPG2Q9BZV3 1241 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 S1PR5Q9H228 398 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 SNX25Q9H3E2 840 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 GDAP2Q9NXN4 497 aa13.75□□□□□ -0.21
CDT1-203ENST00000569140 DDX43Q9NXZ2 648 aaKnown RBP13.75□□□□□ -0.21
CDT1-203ENST00000569140 ARMCX3Q9UH62 379 aaPredicted RBP13.75□□□□□ -0.21
CDT1-203ENST00000569140 IKBKBO14920 756 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 TBC1D4O60343 1298 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 FGFR1OPO95684 399 aaKnown RBP13.74□□□□□ -0.21
CDT1-203ENST00000569140 HLA-DRAP01903 254 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 ATICP31939 592 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 MXI1P50539 228 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 NLRP12P59046 1061 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 CLDN10P78369 228 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 PPP3CAQ08209 521 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 ZACNQ401N2 412 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 ZNF667Q5HYK9 610 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 CCDC183Q5T5S1 534 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 TPGS2Q68CL5 300 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 SASS6Q6UVJ0 657 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 MLKLQ8NB16 471 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 OR6B3Q8NGW1 331 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 FEZF2Q8TBJ5 459 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 HDAC7Q8WUI4 952 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 RPGRIP1Q96KN7 1286 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 NECTIN4Q96NY8 510 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 DUSP9Q99956 384 aaKnown RBP13.74□□□□□ -0.21
CDT1-203ENST00000569140 PI4K2AQ9BTU6 479 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
CDT1-203ENST00000569140 TMEM8AQ9HCN3 771 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 ZDHHC7Q9NXF8 308 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 RWDD2AQ9UIY3 292 aa13.74□□□□□ -0.21
CDT1-203ENST00000569140 HCRTO43612 131 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 XYLBO75191 536 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 VNN1O95497 513 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 P4HA1P13674 534 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 ATF2P15336 505 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 RAP1GAPP47736 663 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 SOWAHAQ2M3V2 549 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 SGSM1Q2NKQ1 1148 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 MGAT5BQ3V5L5 792 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 C1orf220Q5T0J3 134 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 KRT39Q6A163 491 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 FILIP1Q7Z7B0 1213 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 GPR149Q86SP6 731 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 ZC3H3Q8IXZ2 948 aaKnown RBP13.73□□□□□ -0.21
CDT1-203ENST00000569140 DCP1BQ8IZD4 617 aaKnown RBP13.73□□□□□ -0.21
CDT1-203ENST00000569140 SEPT5Q99719 369 aaPredicted RBP13.73□□□□□ -0.21
CDT1-203ENST00000569140 PRKD2Q9BZL6 878 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 ZCWPW1Q9H0M4 648 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 POMKQ9H5K3 350 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 METTL14Q9HCE5 456 aaKnown RBP13.73□□□□□ -0.21
CDT1-203ENST00000569140 ABI2Q9NYB9 513 aaPredicted RBP13.73□□□□□ -0.21
CDT1-203ENST00000569140 AFF4Q9UHB7 1163 aaKnown RBP13.73□□□□□ -0.21
CDT1-203ENST00000569140 SLC27A5Q9Y2P5 690 aa13.73□□□□□ -0.21
CDT1-203ENST00000569140 MTMR11A4FU01 709 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 ABLIM3O94929 683 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 SEC24AO95486 1093 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 C1RP00736 705 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 PDGFRBP09619 1106 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 HNRNPA1P09651 372 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDT1-203ENST00000569140 CCDC192P0DO97 292 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 PCSK1P29120 753 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 LHX1P48742 406 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 PSMC1P62191 440 aaKnown RBP13.72□□□□□ -0.21
CDT1-203ENST00000569140 ENPEPQ07075 957 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 TWF1Q12792 350 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 GPR17Q13304 367 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 SPOPLQ6IQ16 392 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
CDT1-203ENST00000569140 C15orf39Q6ZRI6 1047 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 OSTM1Q86WC4 334 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 ADHFE1Q8IWW8 467 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 ELMOD1Q8N336 334 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 ATAD1Q8NBU5 361 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 CMASQ8NFW8 434 aaPredicted RBP13.72□□□□□ -0.21
CDT1-203ENST00000569140 FAM200AQ8TCP9 573 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 TAS1R2Q8TE23 839 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 SUSD6Q92537 303 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 RTP3Q9BQQ7 232 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 MRPL45Q9BRJ2 306 aaKnown RBP13.72□□□□□ -0.21
CDT1-203ENST00000569140 PHF7Q9BWX1 381 aaPredicted RBP13.72□□□□□ -0.21
CDT1-203ENST00000569140 SMYD3Q9H7B4 428 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 INSL5Q9Y5Q6 135 aa13.72□□□□□ -0.21
CDT1-203ENST00000569140 MTCL1Q9Y4B5 1905 aaKnown RBP13.71□□□□□ -0.21
CDT1-203ENST00000569140 A8MXQ7 604 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 SOAT2O75908 522 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 STAU1O95793 577 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms