RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 FMNL3Q8IVF7 1028 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 GALNT15Q8N3T1 639 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 ASAP3Q8TDY4 903 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 USP33Q8TEY7 942 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 EXOC4Q96A65 974 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 UROC1Q96N76 676 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 TBC1D32Q96NH3 1257 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 PPP1R10Q96QC0 940 aaKnown RBP12.35□□□□□ -0.43
CDH3-208ENST00000569036 XPNPEP1Q9NQW7 623 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 WRAP73Q9P2S5 460 aaPredicted RBP12.35□□□□□ -0.43
CDH3-208ENST00000569036 MMP17Q9ULZ9 603 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 FLNCQ14315 2725 aa12.35□□□□□ -0.43
CDH3-208ENST00000569036 KNTC1P50748 2209 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 DOPEY1Q5JWR5 2465 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 SYN3O14994 580 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 SLC28A2O43868 658 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 VNN2O95498 520 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 CPB1P15086 417 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 GABRR2P28476 465 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 LIFRP42702 1097 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 EPHB3P54753 998 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 CYP4F8P98187 520 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 PLD1Q13393 1074 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 CRY1Q16526 586 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 BEST2Q8NFU1 509 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 WHAMMQ8TF30 809 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 CD101Q93033 1021 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 KIF2CQ99661 725 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 MTRQ99707 1265 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 NFKBIZQ9BYH8 718 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 CRISPLD1Q9H336 500 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 TASP1Q9H6P5 420 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 DENND4CQ5VZ89 1909 aa12.34□□□□□ -0.43
CDH3-208ENST00000569036 ESYT2A0FGR8 921 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 ANTXRLA6NF34 631 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 E9PAM4 449 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 EML1O00423 815 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 ALDH1A2O94788 518 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 ATXN1LP0C7T5 689 aaKnown RBP12.33□□□□□ -0.44
CDH3-208ENST00000569036 HLA-EP13747 358 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 QARSP47897 775 aaKnown RBP12.33□□□□□ -0.44
CDH3-208ENST00000569036 SEC13P55735 322 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 C2orf27AQ580R0 203 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 ZNF280DQ6N043 979 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 TMEM92Q6UXU6 159 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 CCDC33Q8N5R6 958 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 DEFB119Q8N690 84 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 RIN3Q8TB24 985 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 BAHD1Q8TBE0 780 aaPredicted RBP12.33□□□□□ -0.44
CDH3-208ENST00000569036 UBE2Q2Q8WVN8 375 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 TMEM87BQ96K49 555 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 ARID3AQ99856 593 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 ZMYND12Q9H0C1 365 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 PDZD7Q9H5P4 517 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 CCL26Q9Y258 94 aa12.33□□□□□ -0.44
CDH3-208ENST00000569036 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 RRP8O43159 456 aaKnown RBP12.32□□□□□ -0.44
CDH3-208ENST00000569036 AP5Z1O43299 807 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 KRT38O76015 456 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 FGF19O95750 216 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 C6P13671 934 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 CYP4A11Q02928 519 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 SOX4Q06945 474 aaPredicted RBP12.32□□□□□ -0.44
CDH3-208ENST00000569036 NOSTRINQ8IVI9 506 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 CCDC26Q8TAB7 109 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 PSMG2Q969U7 264 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 WBP1Q96G27 269 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 PGLYRP2Q96PD5 576 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 SLC46A2Q9BY10 475 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 LNPKQ9C0E8 428 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 UPF2Q9HAU5 1272 aaKnown RBP12.32□□□□□ -0.44
CDH3-208ENST00000569036 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 RBM28Q9NW13 759 aaKnown RBP12.32□□□□□ -0.44
CDH3-208ENST00000569036 GDAQ9Y2T3 454 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 ABCA12Q86UK0 2595 aa12.32□□□□□ -0.44
CDH3-208ENST00000569036 LRRK2Q5S007 2527 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 BOD1L1Q8NFC6 3051 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 GOLGA8CPA6NN73 597 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 PLK4O00444 970 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
CDH3-208ENST00000569036 MCM5P33992 734 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 IL12RB1P42701 662 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 CXADRP78310 365 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 RPL6Q02878 288 aaKnown RBP12.31□□□□□ -0.44
CDH3-208ENST00000569036 ZNF33AQ06730 810 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 BYSLQ13895 437 aaKnown RBP12.31□□□□□ -0.44
CDH3-208ENST00000569036 SMAD1Q15797 465 aaKnown RBP12.31□□□□□ -0.44
CDH3-208ENST00000569036 Q4G0T1 1027 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 DNAJB7Q7Z6W7 309 aaPredicted RBP12.31□□□□□ -0.44
CDH3-208ENST00000569036 CPA6Q8N4T0 437 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 SETD7Q8WTS6 366 aaKnown RBP12.31□□□□□ -0.44
CDH3-208ENST00000569036 NXPE2Q96DL1 559 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 ECT2Q9H8V3 914 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 BCCIPQ9P287 314 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDH3-208ENST00000569036 ASB3Q9Y575 518 aa12.31□□□□□ -0.44
CDH3-208ENST00000569036 OBSL1O75147 1896 aa12.3□□□□□ -0.44
CDH3-208ENST00000569036 A0A1W2PQD8 194 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms