RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 TBC1D4O60343 1298 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 OAZ2O95190 189 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 STAU1O95793 577 aaKnown RBP10.84□□□□□ -0.67
PKM-221ENST00000568743 WEE2P0C1S8 567 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 SPATA31D3P0C874 917 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 EPCAMP16422 314 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 ACAT1P24752 427 aaKnown RBP10.84□□□□□ -0.67
PKM-221ENST00000568743 KLRC2P26717 231 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 OR1D2P34982 312 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 ASPAP45381 313 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 ZNF445P59923 1031 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 APBA1Q02410 837 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 CETN1Q12798 172 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 SKIV2LQ15477 1246 aaKnown RBP10.84□□□□□ -0.67
PKM-221ENST00000568743 DUSP6Q16828 381 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 CCDC142Q17RM4 750 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 WDR44Q5JSH3 913 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 PDXDC1Q6P996 788 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 EP400NLQ6ZTU2 488 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 SPATA31D4Q6ZUB0 917 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 LIMS2Q7Z4I7 341 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 PALB2Q86YC2 1186 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 CCDC150Q8NCX0 1101 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 RNF214Q8ND24 703 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 VN1R2Q8NFZ6 395 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 OR10T2Q8NGX3 314 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 LMO3Q8TAP4 145 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 TAF4BQ92750 862 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 ARID3AQ99856 593 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 NIF3L1Q9GZT8 377 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.84□□□□□ -0.67
PKM-221ENST00000568743 DDX43Q9NXZ2 648 aaKnown RBP10.84□□□□□ -0.67
PKM-221ENST00000568743 GCNT4Q9P109 453 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 FNIP2Q9P278 1114 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 LIMA1Q9UHB6 759 aaKnown RBP10.84□□□□□ -0.67
PKM-221ENST00000568743 DSEQ9UL01 958 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 SSX2IPQ9Y2D8 614 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 BACE2Q9Y5Z0 518 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 VWA8A3KMH1 1905 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 ATG2AQ2TAZ0 1938 aa10.84□□□□□ -0.67
PKM-221ENST00000568743 REV3LO60673 3130 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 PMM2O15305 246 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 P4HA2O15460 535 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 CAVIN2O95810 425 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 ADH1AP07327 375 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 TPM2P07951 284 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 PDGFRBP09619 1106 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 P4HA1P13674 534 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 CPB1P15086 417 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 CD58P19256 250 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 WARSP23381 471 aaKnown RBP10.83□□□□□ -0.68
PKM-221ENST00000568743 LMO2P25791 158 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 NDUFV1P49821 464 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 COPB1P53618 953 aaKnown RBP10.83□□□□□ -0.68
PKM-221ENST00000568743 PSMC1P62191 440 aaKnown RBP10.83□□□□□ -0.68
PKM-221ENST00000568743 ROR1Q01973 937 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 CREMQ03060 361 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 ORC1Q13415 861 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 EXOC3L4Q17RC7 722 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 APTXQ7Z2E3 356 aaKnown RBP10.83□□□□□ -0.68
PKM-221ENST00000568743 ARHGEF19Q8IW93 802 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 GPR65Q8IYL9 337 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 TMEM86AQ8N2M4 240 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 EHBP1Q8NDI1 1231 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 ANKRD20A12PQ8NF67 263 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 OR6B3Q8NGW1 331 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 MAFAQ8NHW3 353 aaPredicted RBP10.83□□□□□ -0.68
PKM-221ENST00000568743 KAT5Q92993 513 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 PPP2R3CQ969Q6 453 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 SNX25Q9H3E2 840 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 HMGXB4Q9UGU5 601 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 NME7Q9Y5B8 376 aa10.83□□□□□ -0.68
PKM-221ENST00000568743 TSC2P49815 1807 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 WDR27A2RRH5 827 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 OR6C75A6NL08 312 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 GOLGA6L19H0YKK7 550 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 GABRDO14764 452 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 TGM5O43548 720 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 ATP2C2O75185 946 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 TACC1O75410 805 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 GLP2RO95838 553 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 GLUD1P00367 558 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 SLC9A1P19634 815 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 GNL1P36915 607 aaPredicted RBP10.82□□□□□ -0.68
PKM-221ENST00000568743 LHX1P48742 406 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 CLCN4P51793 760 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 PTPN21Q16825 1174 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 SLC39A12Q504Y0 691 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 SLC8B1Q6J4K2 584 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 GJB7Q6PEY0 223 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 RNF19BQ6ZMZ0 732 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 GBP6Q6ZN66 633 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 RRAGAQ7L523 313 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 DPH6Q7L8W6 267 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 LRRTM3Q86VH5 581 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 THEM5Q8N1Q8 247 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 PPM1KQ8N3J5 372 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 SLC22A17Q8WUG5 538 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 NT5C1BQ96P26 610 aa10.82□□□□□ -0.68
PKM-221ENST00000568743 PGLYRP2Q96PD5 576 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms