RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 DERAQ9Y315 318 aa17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 TPRP12270 2363 aaKnown RBP17.09■□□□□ 0.33
HERPUD1-215ENST00000568676 NUP210Q8TEM1 1887 aaPredicted RBP17.08■□□□□ 0.33
HERPUD1-215ENST00000568676 LACTBL1A8MY62 500 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 HNRNPDLO14979 420 aaKnown RBP17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 KRT37O76014 449 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 PIGRP01833 764 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 CYP11A1P05108 521 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 SOX9P48436 509 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 MCM2P49736 904 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 SLC12A3P55017 1021 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 AMPD2Q01433 879 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 IL17AQ16552 155 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 ST3GAL2Q16842 350 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 ITPRIPL2Q3MIP1 535 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 IL31Q6EBC2 164 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 TXNDC11Q6PKC3 985 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 Q6ZS52 159 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 FAM160A2Q8N612 972 aaPredicted RBP17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 ATAD1Q8NBU5 361 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 SENP8Q96LD8 212 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 GTSE1Q9NYZ3 720 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 SLC27A5Q9Y2P5 690 aa17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 KMT2BQ9UMN6 2715 aaPredicted RBP17.08■□□□□ 0.32
HERPUD1-215ENST00000568676 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 AKAP3O75969 853 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 PLA2G4BP0C869 781 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 ATP2C1P98194 919 aaPredicted RBP17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 SPAG1Q07617 926 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 DMWDQ09019 674 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 RAD51AP2Q09MP3 1159 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 PON2Q15165 354 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 ZRSR1Q15695 479 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 TAF12Q16514 161 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 STXBP5Q5T5C0 1151 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 ARL6IP4Q66PJ3 421 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 HEATR6Q6AI08 1181 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 EXOC4Q96A65 974 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 HAPLN2Q9GZV7 340 aa17.07■□□□□ 0.32
HERPUD1-215ENST00000568676 FAM189A1O60320 539 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 ZNF806P0C7X5 589 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 DDX6P26196 483 aaKnown RBP eCLIP17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 TNFSF9P41273 254 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 POU5F1Q01860 360 aaKnown RBP17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 GRSF1Q12849 480 aaKnown RBP eCLIP17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 SRSF5Q13243 272 aaKnown RBP17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 AASDHQ4L235 1098 aaPredicted RBP17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 WDR44Q5JSH3 913 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 CACNA2D4Q7Z3S7 1137 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 METTL23Q86XA0 190 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 THEM5Q8N1Q8 247 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 C12orf50Q8NA57 414 aaPredicted RBP17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 SPPL2BQ8TCT7 592 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 GAB3Q8WWW8 586 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 AK8Q96MA6 479 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 LRRC3BQ96PB8 259 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 PNMA5Q96PV4 448 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 TMEM209Q96SK2 561 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 ASB7Q9H672 318 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 KIF9Q9HAQ2 790 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 TBX20Q9UMR3 447 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 PCDHGA5Q9Y5G8 931 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 SPTBN2O15020 2390 aa17.06■□□□□ 0.32
HERPUD1-215ENST00000568676 A0A0B4J269 797 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 PIRO00625 290 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 NEFLP07196 543 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 MGAT5BQ3V5L5 792 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 C9orf57Q5W0N0 161 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 CMTM8Q8IZV2 173 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 CAMKK1Q8N5S9 505 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 CHAMP1Q96JM3 812 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 ZFYVE19Q96K21 471 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 SEPT5Q99719 369 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 ZCWPW1Q9H0M4 648 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 CPSF3Q9UKF6 684 aaKnown RBP17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 C2CD2Q9Y426 696 aa17.05■□□□□ 0.32
HERPUD1-215ENST00000568676 MYH11P35749 1972 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 ANO9A1A5B4 782 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 GDF9O60383 454 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 RPP40O75818 363 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 EPN2O95208 641 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 PRAMEF12O95522 483 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 AVPR1AP37288 418 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 RAP1GAPP47736 663 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 TMEM132DQ14C87 1099 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 TMEM119Q4V9L6 283 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 SLC39A12Q504Y0 691 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 TMEM196Q5HYL7 178 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 JADE1Q6IE81 842 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 TTC9BQ8N6N2 239 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 OR10T2Q8NGX3 314 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 MSTO1Q9BUK6 570 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 IL21Q9HBE4 155 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 PARVGQ9HBI0 331 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 ANGPTL2Q9UKU9 493 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 SLC8A2Q9UPR5 921 aa17.04■□□□□ 0.32
HERPUD1-215ENST00000568676 K7ENM7 598 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms