RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 STXBP2Q15833 593 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 PARP6Q2NL67 630 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 TFDP3Q5H9I0 405 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 HHATQ5VTY9 493 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 CIAPIN1Q6FI81 312 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 RHBDF2Q6PJF5 856 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 BLOC1S3Q6QNY0 202 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 NSMFQ6X4W1 530 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 MON1BQ7L1V2 547 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 EXOC3L1Q86VI1 746 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 VSIG1Q86XK7 387 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 CEP57Q86XR8 500 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 CBWD2Q8IUF1 395 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 WDR49Q8IV35 697 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 KSR1Q8IVT5 923 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 MAP7D3Q8IWC1 876 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 CPXCR1Q8N123 301 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 TEX9Q8N6V9 391 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 NIPA2Q8N8Q9 360 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 ATP11CQ8NB49 1132 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 FNIP1Q8TF40 1166 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 SLC16A10Q8TF71 515 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 DDX1Q92499 740 aaKnown RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 THAP11Q96EK4 314 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 AGBL1Q96MI9 1066 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 KREMEN1Q96MU8 473 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 TMEM237Q96Q45 408 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 PCDHB18PQ96TA0 734 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 GMLQ99445 158 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 FAM213AQ9BRX8 229 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 TEX13BQ9BXU2 312 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 OSBPL7Q9BZF2 842 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 FAM96AQ9H5X1 160 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 PRDM16Q9HAZ2 1276 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 PCDH9Q9HC56 1237 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 RNF146Q9NTX7 359 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 RBAKQ9NYW8 714 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 PSMC3IPQ9P2W1 217 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-250ENST00000568290 CTNNAL1Q9UBT7 734 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 BAIAP2L1Q9UHR4 511 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 PCDHGC3Q9UN70 934 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 AGTPBP1Q9UPW5 1226 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 PPP2R3BQ9Y5P8 575 aa8.07□□□□□ -1.12
ATXN3-250ENST00000568290 ANKRD31Q8N7Z5 1873 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 LOC102724159A0A0B4J2E5 919 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 CLRN2A0PK11 232 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 GOLGA8IPA6NC78 632 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 GOLGA8JA6NMD2 632 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 TCP11X1B4DZS4 312 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 RNF8O76064 485 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 IL18RAPO95256 599 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 ACSL3O95573 720 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 ATP6V1G2O95670 118 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 SHBGP04278 402 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 CLTAP09496 248 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 SUPT20HL2P0C7V6 817 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 ICAM3P32942 547 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 SLC26A2P50443 739 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 ELF3P78545 371 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 MRPS9P82933 396 aaKnown RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 PLCB3Q01970 1234 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 TFDP2Q14188 446 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 CRYMQ14894 314 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 PWP2Q15269 919 aaKnown RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 STILQ15468 1287 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 SIX1Q15475 284 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 ZYXQ15942 572 aaKnown RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 PTPROQ16827 1216 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 DUOXA2Q1HG44 320 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 SUPT20HL1Q3ZLR7 823 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 FAM47CQ5HY64 1035 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 C1orf220Q5T0J3 134 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 C6orf163Q5TEZ5 329 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 IER5Q5VY09 327 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 TTC27Q6P3X3 843 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 C15orf39Q6ZRI6 1047 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 ERICH1Q86X53 443 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 PPIL6Q8IXY8 311 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 PDIK1LQ8N165 341 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 RBBP8NLQ8NC74 664 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 OLIG1Q8TAK6 271 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 TAS1R2Q8TE23 839 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 EPS8L3Q8TE67 593 aaKnown RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 C1orf54Q8WWF1 131 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 RSAD2Q8WXG1 361 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 KAT2BQ92831 832 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 NKD2Q969F2 451 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 ANKRD36BP1Q96IX9 119 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 C12orf42Q96LP6 360 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 TAAR1Q96RJ0 339 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 RBM15Q96T37 977 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 MSTO1Q9BUK6 570 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 MRPL4Q9BYD3 311 aaKnown RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 POLR3FQ9H1D9 316 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 PORCNQ9H237 461 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 NOD2Q9HC29 1040 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 RAVER2Q9HCJ3 691 aaKnown RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 ZNF302Q9NR11 478 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 SAR1AQ9NR31 198 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms